YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC323.01c
Organism:	Schizosaccharomyces pombe
Length:	361 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC323.01c.

Description	E-value	Query Range	Subject Range
gi\|66523738 - gi\|66523738\|ref\|XP_392018.2\| PREDICTED: similar to CG33156-PB, isoform B isoform 1 [Apis mellifera]	359.0	[0..13]	[360..53]
gi\|91089195 - gi\|91089195\|ref\|XP_974485.1\| PREDICTED: similar to CG33156 CG33156-PE [Tribolium castaneum]	355.0	[0..14]	[360..112]
gi\|108884490, gi... - gi\|157127063\|ref\|XP_001654785.1\| poly(p)/atp nad kinase [Aedes aegypti], gi\|108884490\|gb\|EAT48715.1\|...	354.0	[0..14]	[359..1]
gi\|62955137, gi\|... - gi\|62955137\|ref\|NP_001017580.1\| NAD kinase [Danio rerio], gi\|62205113\|gb\|AAH92723.1\| Zgc:110083 [Dan...	348.0	[0..1]	[360..48]
PPNK_VIBPA - Probable inorganic polyphosphate/ATP-NAD kinase OS=Vibrio parahaemolyticus GN=ppnK PE=3 SV=1 NADK_VIBPA - NAD kinase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=nadK PE=3 SV=1 gi\|149748894, gi... - gi\|153837699\|ref\|ZP_01990366.1\| probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kin...	346.0	[0..66]	[355..8]
gi\|55743112 - ref\|NP_075394.3\| NAD kinase [Homo sapiens] NADK - NAD kinase	345.0	[0..3]	[361..50]
gi\|91190041, gi\|... - gi\|91225098\|ref\|ZP_01260320.1\| inorganic polyphosphate/ATP-NAD kinase [Vibrio alginolyticus 12G01], ...	345.0	[0..66]	[355..8]
gi\|119113331, gi... - gi\|119113331\|ref\|XP_309524.3\| ENSANGP00000012587 [Anopheles gambiae str. PEST], gi\|116131739\|gb\|EAA0...	345.0	[0..14]	[359..115]

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Predicted Domain #1

Region A:
Residues: [1-361]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRAANGFRI SVRNTAVCLA PNFRQLKGFS IINLGSLQYF QCASPQSIGG KSNLKQLQWP  60
   61 KPPKNILILK KRMDERVDHC FETLVQHLQQ TYPDICIITE TDVAKKFSYL NLYTWTEISD 120
  121 LEQKVDAIIT VGGDGTILHA ASLFARSGMP PILSFSLGTL GFLLPFDFGS FQTAFADFYN 180
  181 SRSFVLMRMR LRVAMKTKLY NESIYAMNEM HIHRGLSPHM AVLKVFVNDK FLTEAVADGL 240
  241 IISTPTGSTA YSLSSGGPIV HPSINALLLT PICPNSLSFR PVLFPDTFKI SIETSNKSRV 300
  301 RPQLSIDGRP LGLTDIGQRI DITSVKDNAI PCIIRSHKED DWVSDIVSLL RWNHPFHRKG 360
  361 W

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	91.0
Match:	2an1A
Description:	Structural Genomics, The crystal structure of a putative kinase from Salmonella typhimurim LT2
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits