| Protein: | nca2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 573 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nca2.
| Description | E-value | Query Range |
Subject Range |
|
|
596.0 | [0..56] | [569..107] |
|
|
590.0 | [0..43] | [570..84] |
|
|
576.0 | [0..25] | [569..62] |
|
|
492.0 | [0..82] | [570..142] |
|
|
479.0 | [0..66] | [569..100] |
|
|
476.0 | [0..143] | [562..126] |
|
|
470.0 | [0..61] | [570..101] |
|
|
424.0 | [0..132] | [573..247] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MELYQKHLKD VYANFNKLAA VHGETTSNSV TFHVFQQLDS TNLTNYQLEN VITQVKELDK 60
61 GPKDYLYWVI LGRCSAHLHV KMLDQLLEEA MIMSDNLHYW ESIDKNWYSR VLFLIQSFPT 120
121 RLYHICRNSI KSILQFQNFS N
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.676 | a.246.1 | Description not found. |
| View | Download | 0.671 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.577 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.486 | a.246.1 | Description not found. |
| View | Download | 0.468 | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.444 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.371 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.364 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.338 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.324 | a.118.9 | ENTH/VHS domain |
|
Region A: Residues: [142-243] |
1 11 21 31 41 51
| | | | | |
1 IFAKKNLFPK VSKSDVLLFP RDAFISQASL LSLIRHEYRG NAKRLRQLRD EHACKIGCLT 60
61 RAIMSEGVSD AASSSGDKNG ISAKADLKQV VSQWIQRLSQ LQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.592 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.592 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.573 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.573 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.550 | a.70.2 | Description not found. |
| View | Download | 0.517 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.487 | a.7.12 | Description not found. |
| View | Download | 0.455 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.405 | d.206.1 | YggU-like |
|
Region A: Residues: [244-344] |
1 11 21 31 41 51
| | | | | |
1 GQKIDNSESL PDILSITLDN LSHPTDEYFE AKAYFRPSAI ERNWPKIFVT LLSAWLSTQI 60
61 ITKNRTSIRL WIDYLYSTAV DFYTNWIQKP ILGIFDTIRS N
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.819 | a.24.18 | Description not found. |
| View | Download | 0.769 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.758 | a.246.1 | Description not found. |
| View | Download | 0.729 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.729 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.696 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.696 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.631 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.551 | a.7.6 | Ribosomal protein S20 |
|
Region A: Residues: [345-573] |
1 11 21 31 41 51
| | | | | |
1 RADSQITLLQ TKSLESDMES LQRMVIDFVS DTSPAGINLD LVKQEVQQGD LTYVLQAYEH 60
61 DLKTPIRTAV SGNLVRTLLI QLQKTKVDVE VALSGIDRLL KSQELVFATV GITPSLIFCY 120
121 VIIRYVKANI FNNDTLSRAE RRQRFRQSLR AAERILVRSQ KMNSLDDMSY GLLVFQVNLM 180
181 AIMSMDMGLS KDVAEDLLQD LEDIQSSSYG VQAQLRAVDR IYRLFKNSI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
