YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC823.14
Organism:	Schizosaccharomyces pombe
Length:	229 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC823.14.

Description	E-value	Query Range	Subject Range
gi\|24377930, gi\|... - gi\|24379948\|ref\|NP_721903.1\| putative cation-transporting P-type ATPase PacL [Streptococcus mutans U...	172.0	[0..14]	[224..495]
gi\|119719115, gi... - gi\|119719115\|ref\|YP_919610.1\| ATPase, P-type (transporting), HAD superfamily, subfamily IC [Thermofi...	169.0	[0..13]	[223..468]
gi\|19918508, gi\|... - gi\|20093165\|ref\|NP_619240.1\| sodium/potassium-transporting ATPase, alpha subunit [Methanosarcina ace...	168.0	[0..9]	[224..482]
gi\|76573479 - gi\|76573479\|dbj\|BAE44563.1\| hypothetical protein [Candida albicans] gi\|68471207, gi\|... - gi\|77022444\|ref\|XP_888666.1\| hypothetical protein CaO19_7089 [Candida albicans SC5314], gi\|68471207\|...	167.0	[0..20]	[224..503]
gi\|7543927 - gi\|7543927\|emb\|CAB87245.1\| calcium/mangenease P-type ATPase PMR1 [Candida albicans]	167.0	[0..20]	[224..503]
gi\|22294948, gi\|... - gi\|22298767\|ref\|NP_682014.1\| cation-transporting ATPase PacL-like protein [Thermosynechococcus elong...	166.0	[0..16]	[224..512]
gi\|77172442, gi\|... - gi\|77408942\|ref\|ZP_00785665.1\| cation-transporting ATPase, E1-E2 family [Streptococcus agalactiae CO...	165.0	[0..10]	[224..483]
gi\|77867288, gi\|... - gi\|77953846\|ref\|ZP_00818250.1\| Phosphoserine phosphatase SerB:HAD-superfamily hydrolase subfamily IB...	164.0	[0..3]	[219..186]
gi\|76787455, gi\|... - gi\|76787455\|ref\|YP_329649.1\| cation transporter HAD ATPase [Streptococcus agalactiae A909], gi\|76562...	164.0	[0..10]	[224..483]
gi\|22537074, gi\|... - gi\|22537074\|ref\|NP_687925.1\| cation transporter E1-E2 family ATPase [Streptococcus agalactiae 2603V/... gi\|77175650, gi\|... - gi\|77405728\|ref\|ZP_00782814.1\| cation-transporting ATPase, E1-E2 family [Streptococcus agalactiae H3... gi\|76799203, gi\|... - gi\|76799203\|ref\|ZP_00781381.1\| cation-transporting ATPase, E1-E2 family [Streptococcus agalactiae 18...	164.0	[0..10]	[224..483]

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Predicted Domain #1

Region A:
Residues: [1-229]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKKQLYVF SDFDGTITLQ DSNDYLTDNF GMGNANRVNL NQQVLDGSIS FRDAFAKMLD  60
   61 SVHLSYDEAL EVLKKNVAID PSFKPFYEWC KSQDIRVIIL SSGMEPFIRA LFEQYLGKEE 120
  121 ASSIEIVSND INVHPDGQWN IVYHDDSHFG HDKSLTIRPY AQLPESKRPH MVYCGDGVSD 180
  181 LSAAKETEHL FAKKGRDLIK YCEREKISFS EFETFADIHK DLQKLFFSS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	37.045757
Match:	1iwoA
Description:	Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits