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View Structure Prediction Details

Protein: mto2
Organism: Schizosaccharomyces pombe
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mto2.

Description E-value Query
Range
Subject
Range
gi|6474617 - gi|6474617|dbj|BAA87275.1| Hypothetical protein [Schizosaccharomyces pombe]
293.0 [0..191] [348..1]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEHNYQSDR EVAEDPFLNY EASANQLSSN SRESTPRGSP WRAGMRSASL MTEPLEDSMY  60
   61 SDNNYLDNGV SFTKDENPLY SPSWPSLADA NVNSMKSNNA IQEHKAAKFV SEKSLEKVST 120
  121 ADNNLVLQEL ENLRERLNQV ELQLSERPSS YLGYHNNLSP YRSPNSYPSL LPSTHSPHSP 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [181-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APLSTMQTAL MRLRTYHPSP IILKPVEQAV NHAITLVNTS PSSVVDALCR SLAELCLGLV  60
   61 QEAIDASILS QQESSNSLDL VRHTPPLNYT SSVDSSPQRM ASDSYGRPSL HLNDPFPSVD 120
  121 LQSNELSHHN VRTTLFSDDS RFHSKIHTHS TPPSQMYSAA SHFRYRSDPS TRHVSNSTNK 180
  181 SSLHPSPTSL RVAHPIIPQR ASPASQSFPS LQDTPSP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle