YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAP8A3.10
Organism:	Schizosaccharomyces pombe
Length:	171 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAP8A3.10.

Description	E-value	Query Range	Subject Range
gi\|74219629 - gi\|74219629\|dbj\|BAE29582.1\| unnamed protein product [Mus musculus]	235.0	[0..1]	[171..1]
gi\|57526905, gi\|... - gi\|57526905\|ref\|NP_001009636.1\| Preli [Rattus norvegicus], gi\|56789203\|gb\|AAH88284.1\| PRELI domain c...	235.0	[0..1]	[171..1]
gi\|73953256 - gi\|73953256\|ref\|XP_852403.1\| PREDICTED: similar to Px19-like protein (25 kDa protein of relevant evo...	234.0	[0..1]	[171..1]
gi\|109079906, gi... - gi\|109079908\|ref\|XP_001088735.1\| PREDICTED: px19-like protein isoform 4 [Macaca mulatta], gi\|1090799... ENSPTRT00000032492 - null	234.0	[0..1]	[171..1]
gi\|209736870 - gi\|209736870\|gb\|ACI69304.1\| PRELI domain-containing protein 1, mitochondrial precursor [Salmo salar] PRELID1 - PRELI domain containing 1 gi\|123995091, gi... - gi\|123995091\|gb\|ABM85147.1\| px19-like protein [synthetic construct], gi\|123980278\|gb\|ABM81968.1\| px1...	233.0	[0..1]	[171..1]
PRLD1_CHICK - PRELI domain-containing protein 1, mitochondrial OS=Gallus gallus GN=PRELID1 PE=2 SV=1	233.0	[0..1]	[171..1]

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Predicted Domain #1

Region A:
Residues: [1-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAICTDKTE LNASWNTVSS AWLTRYPNPY SLHVVSADVL ERYVDDEGRL YTERLLVKQG  60
   61 RLPRWASDLL NVNKSYILER SVIDPSKQEL KSETFNLDHV KILRVIEYSR FIQSSENCSK 120
  121 TIVDTIAKFV SPLRFGLGRR VQKYSLKRFQ EQLSSSRRGL LYVIQQKFQP S

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	76.481486
Match:	PF04707.5
Description:	No description for PF04707.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits