| Protein: | SPCC126.04c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 344 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC126.04c.
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..8] | [315..11] |
|
|
186.0 | [0..50] | [315..433] |
|
|
185.0 | [0..3] | [310..1543] |
|
|
180.0 | [0..11] | [306..1140] |
|
|
175.0 | [0..56] | [318..52] |
|
|
173.0 | [0..41] | [329..104] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MLTEQQTLEL FPENWERNEQ VLLKYPDGLP KDVLADQRVD NTESQVKDEI TSNITNQTQI 60
61 LLPADSFPQY GSYPNNSELD YVVCTKCDRP FLSEYIEDHH SSCNGIKPPK PQFEPVANSQ 120
121 VLNKDVNNGN NAPIKNGVKS TAKGSAGNHE KN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [153-268] |
1 11 21 31 41 51
| | | | | |
1 SVNGQKNPEM PPKRRKTEEN KKPTKSALPK KEASKKKNPK VKGPVDVEKQ CGVLLPNGQM 60
61 CARSLTCKTH SMSSKRAVPG RSQPYDVLLA ACQKKNQVKI QRQILETAKE SEDNQH
|
| Detection Method: | |
| Confidence: | 45.070581 |
| Match: | PF08313.3 |
| Description: | No description for PF08313.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [269-344] |
1 11 21 31 41 51
| | | | | |
1 QAPVDSDEEV SFIMNVLQKS GNQPLEQKVF LPVKRRHSYF RTRELIAAAF RHGEQGMQVT 60
61 GTILGRVIPF SARQPL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.840 | a.8.11 | Description not found. |
| View | Download | 0.787 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.776 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.765 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.741 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.707 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.704 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.685 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.682 | a.144.1 | PABC (PABP) domain |
