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View Structure Prediction Details

Protein: mod21
Organism: Schizosaccharomyces pombe
Length: 618 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for mod21.

Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIQGREDLE MPLRNACEVL NRQTVSVKQS ILHAQILKLF LELSKPPSDI HVPQIPVYKD  60
   61 CNKNEQEAII QLLTSCEGDH WLMPDWSSMP DDETITEDSE EETFNGNANE ITIPANIHIP 120
  121 IIEESDNASN NKLCTLFKKS KQPNLDFLQI KPFMFWDSSL NETVRISERS IIRDSIYMLI 180
  181 GYPSFFFLKN GSKIETRLSL LPKLHHMSEE ILRSIMTELA DYGSNLEFFR QKLTSPSDSF 240
  241 FKSDDQSTKN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [251-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPFLSVVFIY PQIKPHLLSC LKNTHQELIK LETEVYNATK NCTLFQFFQH VKKFVDPLLC  60
   61 FRFAYEKSAT NMWDFVKTLE FIYSTRNYSS QMFKLYKASA IAMLLWMVNQ ASQITSSMTI 120
  121 ARPLYNILIL CKDF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.906 a.8.4 Description not found.
View Download 0.811 a.29.3 Acyl-CoA dehydrogenase C-terminal domain-like
View Download 0.749 f.18.1 F1F0 ATP synthase subunit A
View Download 0.749 f.18.1 F1F0 ATP synthase subunit A
View Download 0.715 a.25.1 Ferritin-like
View Download 0.667 a.25.1 Ferritin-like
View Download 0.614 a.79.1 Antitermination factor NusB
View Download 0.614 a.47.2 t-snare proteins
View Download 0.595 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.590 a.133.1 Phospholipase A2, PLA2

Predicted Domain #3
Region A:
Residues: [385-618]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNNFLEKDNI ALQLGSIVFD QSPTLNNLLV EMEILIRSKI LKLGKSLDLS FDFQSLMGEF  60
   61 ENLIKQQEEA KKSLWSKRFS RFYYGHYVFV NTCHNFFLTL YQSFTEVDEN SIFNGVFETL 120
  121 NNDVDDESVI GEKEKLILKQ KQKCLSEFFV DDIKKLLNEE LLNCQKQELP DVMENTYQIS 180
  181 TVSGIKNDPL FTLDQTCNII AKLADNLIHP SVPIGSSAYR CRRNLADLLF LIMP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle