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View Structure Prediction Details

Protein: SPCC594.02c
Organism: Schizosaccharomyces pombe
Length: 489 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC594.02c.

Description E-value Query
Range
Subject
Range
gi|42545332, gi|... - gi|46110639|ref|XP_382377.1| hypothetical protein FG02201.1 [Gibberella zeae PH-1], gi|42545332|gb|E...
242.0 [0..72] [246..69]
YHL026C - Putative protein of unknown function; YHL026C is not an essential gene; in 2005 the start site was m...
199.0 [0..88] [293..1]
ZAN - zonadhesin
158.0 [0..190] [488..467]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPAVFTSDY WKKYFSNKKK PTVKNTSDID LLHINRGRQP FDEGLSINED SFFYRHNIHV  60
   61 PRIVYLIIVA CGSFIITGGI EFAIAYGMYK KTETSVRLWR LPDTLSGDAA VTNFVQAIVT 120
  121 YWVESILVQG DLRSGLVKPI YFGWWPENFL LREVLRAKPR YHFKFIVFRW MEWLVFVGLR 180
  181 GLVWSVPLWF LFWPATVGIL CAPGRHEGND YYFNNYPAPQ VFKLIFGGGE GFVLTPWIAF 240
  241 LHMYMYGHYL HVAKNQKSLP KTSDLEQQRG TSSSQPSE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [279-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDANITALPK PEPKMYENSD LTPARTPVTP APLEKPVNLA PEVVEPTNAA ASPLQLNAPK  60
   61 LTDVDDSALA YDPTKVQDGE DRFVHNDVPL ENAENPSRFV HSDAPIDMTH TTTVISEAQN 120
  121 LPSTLLPQDG NAVHHDTDAP SLSNVRKSVD SPRVPPSFSD DAVSSFSLVT APSINNVGGS 180
  181 TAPSVNNQER EYDYDDTSSR SSTLTERPVV H

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle