YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC630.10
Organism:	Schizosaccharomyces pombe
Length:	270 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC630.10.

Description	E-value	Query Range	Subject Range
gi\|32411203, gi\|... - gi\|32411203\|ref\|XP_326082.1\| hypothetical protein [Neurospora crassa], gi\|28924729\|gb\|EAA33842.1\| co... gi\|85109768 - gi\|85109768\|ref\|XP_963078.1\| hypothetical protein NCU06227 [Neurospora crassa OR74A]	362.0	[0..10]	[269..22]
gi\|40740953, gi\|... - gi\|67903736\|ref\|XP_682124.1\| hypothetical protein AN8855.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	345.0	[0..2]	[266..18]
gi\|46111221, gi\|... - gi\|46111221\|ref\|XP_382668.1\| hypothetical protein FG02492.1 [Gibberella zeae PH-1], gi\|42544376\|gb\|E...	342.0	[0..22]	[268..29]
gi\|38112034, gi\|... - gi\|39969147\|ref\|XP_365964.1\| hypothetical protein MGG_10184 [Magnaporthe grisea 70-15], gb\|EAA57509....	339.0	[0..19]	[268..30]
gi\|46096585, gi\|... - gi\|71005384\|ref\|XP_757358.1\| hypothetical protein UM01211.1 [Ustilago maydis 521], ref\|XP_398826.1\| ...	296.0	[0..27]	[266..124]
gi\|115438524, gi... - gi\|115438524\|ref\|XP_001218088.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	294.0	[0..2]	[266..20]
gi\|66851702, gi\|... - gi\|70998688\|ref\|XP_754066.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668517... gi\|159126200 - gi\|159126200\|gb\|EDP51316.1\| conserved hypothetical protein [Aspergillus fumigatus A1163]	291.0	[0..11]	[266..24]
gi\|68482154, gi\|... - gi\|68482281\|ref\|XP_714898.1\| hypothetical protein CaO19.3539 [Candida albicans SC5314], gi\|68482154\|... orf19.3539, orf1... - orf19.3539 CGDID:CAL0005891 Assembly 19, Contig19-10183 (29501, 28515) CDS, reverse complemented, tr...	290.0	[0..43]	[268..101]
gi\|90301261, gi\|... - gi\|90301261\|gb\|EAS30892.1\| hypothetical protein CIMG_06371 [Coccidioides immitis RS], gi\|119182710\|r...	284.0	[0..2]	[268..17]
gi\|169765285 - gi\|169765285\|ref\|XP_001817114.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|220690413, gi... - gi\|238503418\|ref\|XP_002382942.1\| conserved hypothetical protein [Aspergillus flavus NRRL3357], gi\|22... gi\|83764968 - gi\|83764968\|dbj\|BAE55112.1\| unnamed protein product [Aspergillus oryzae]	280.0	[0..2]	[266..18]

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Predicted Domain #1

Region A:
Residues: [1-270]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPIPVKNRI GKNNIDNAKG LKGNKLIRHY HNLLKEKSRL IASSAPIEKI KNVESELENI  60
   61 GIDAYQRASR SGQAEGKGGD SSKILIKWIR TTPCFSYCAR LKEPKDLLEI GSVSVDNKCS 120
  121 TCGLFRVSRI DLHSVHPLIK QQDFLERTPE EGLFTGISCS LVLNFAPPEL RAKMLLHCTG 180
  181 LLMPPNKEQP PWLFLVLPSP CITNSRYMDE KTLHSIMIQF GFICRQKSIS KKIAYYLYSY 240
  241 ECFPMKEIDW KKKIVNDGAT RNNFFIPCIL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.31
Match:	1xtpA
Description:	Structural Analysis of Leishmania major LMAJ004091AAA, a SAM-dependent methyltransferase of the DUF858/Pfam05891 family
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.403277401956396	bayes_pls_golite062009
transferase activity	0.318650776741261	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: