| Protein: | SPBC1734.07c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 618 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1734.07c.
| Description | E-value | Query Range |
Subject Range |
|
|
659.0 | [0..43] | [604..167] |
|
|
650.0 | [0..44] | [602..106] |
|
|
634.0 | [0..45] | [587..99] |
|
|
620.0 | [0..44] | [587..101] |
|
|
604.0 | [0..43] | [587..100] |
|
|
596.0 | [0..44] | [587..101] |
|
|
579.0 | [0..45] | [588..100] |
|
|
579.0 | [0..43] | [604..141] |
|
|
564.0 | [0..43] | [599..5] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MESNLSAKGI FQHASANASG ELFQEPVTED LEKVMQSKGL YSMEELCSII QEAYAPRVSV 60
61 LCSRDADEFA MRKGYPKGFW ELLYPFGDR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.973 | 0.117 | autophagy | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.731 | 0.007 | autophagy | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.624 | 0.006 | autophagy | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.753 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.663 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
|
Region A: Residues: [90-210] |
1 11 21 31 41 51
| | | | | |
1 IRGKVNRRGM NGEMLTLENL NLHFVPIDAL ESHLSEASFP SLRSVLCERY PGLVSPEPPS 60
61 DYSFGVHYKN VERWAWTLAH EGNYQMPLPV YVRQLLTGIP ITPFETFSHP VAHLVVVTSH 120
121 N
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [211-352] |
1 11 21 31 41 51
| | | | | |
1 PSPFESLRSL INSIPYLSLP AFVFNDINYL FVYVHDEDQH DLELSMAIFD TMKQTFGDCG 60
61 YFLRLHSQKA TLDYEHTVPF PTSSWLSAEE RLHLLSNTDT EIRLLFESDN ESLRRLSSHI 120
121 AFNGIVSYLD KCVRAWDDQY AS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [353-541] |
1 11 21 31 41 51
| | | | | |
1 PRRGITGKLL FASRKYLSSS NASTNSNYFP SSNAYRPFSP EAYLRKLADY SFMLRDYSHA 60
61 NQIYEIASRQ YENDGACLYS AASLEMIVIT EHILHLKMPY MSLTNTLRIN EYMQSAMLNY 120
121 LNKSFNSYYH AARCFLLLGQ FLSCLPAPKV DDAANWNAGL LYSKRLGPVG RAMIFQQTHT 180
181 LFKSLSYLK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [542-618] |
1 11 21 31 41 51
| | | | | |
1 TESTDPFSNK RTRKAALWCV LTADAWLRCR IPFRAKPFVE EAKLFYGKID WKDLKECVAA 60
61 LDEVEVSKQP ASNIPSS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.774 | 0.104 | autophagy | a.65.1 | Annexin |
| View | Download | 0.662 | 0.076 | autophagy | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.689 | 0.066 | autophagy | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.657 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.634 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
