YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC869.09
Organism:	Schizosaccharomyces pombe
Length:	116 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC869.09.

Description	E-value	Query Range	Subject Range
SPAC22G7.11c - conserved fungal protein YAAB_SCHPO - UPF0654 protein C22G7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22G7.11c PE=...	142.0	[0..1]	[116..1]
gi\|49097042, gi\|... - gi\|67539348\|ref\|XP_663448.1\| hypothetical protein AN5844.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	110.0	[0..14]	[114..11]
CON6_NEUCR - Conidiation-specific protein 6 OS=Neurospora crassa GN=con-6 PE=2 SV=1 CON6_NEUCR - Conidiation-specific protein 6 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / D...	95.0	[0..3]	[112..8]
gi\|16416058 - gi\|16416058\|emb\|CAB88608.2\| hypothetical protein [Neurospora crassa]	94.0	[0..3]	[111..2]
gi\|2130332, gi\|1... - gi\|2130332\|pir\|\|S62455 hypothetical protein SPAC22G7.11c, SPAC4G8.01c - fission yeast (Schizosacchar...	85.0	[0..47]	[116..1]
gi\|42547252, gi\|... - gi\|46137473\|ref\|XP_390428.1\| hypothetical protein FG10252.1 [Gibberella zeae PH-1], gi\|42547252\|gb\|E...	84.0	[0..5]	[112..4]

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Predicted Domain #1

Region A:
Residues: [1-116]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDPAHIIAG HKAALSNPHV SEEAKERARK YLKEHGSESH YTTGTTRGQK ADADDAGELR  60
   61 EEGFGTKNQF EDNESQAKNL GNVRGGYKAA MHNPKVSQKG RRHAKELLEE VDDESK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits