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View Structure Prediction Details

Protein: meu23
Organism: Schizosaccharomyces pombe
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for meu23.

Description E-value Query
Range
Subject
Range
SPCC569.01c - DUF1773 family protein 5
YQO1_SCHPO - UPF0612 protein C569.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC569.01c PE=3 ...
210.0 [0..9] [252..4]
gi|7491611 - gi|7491611|pir||T40255 hypothetical protein SPBC337.02c - fission yeast (Schizosaccharomyces pombe)
198.0 [0..67] [252..55]
MYO8_ARATH - Myosin-8 OS=Arabidopsis thaliana GN=XI-B PE=3 SV=1
147.0 [0..24] [209..889]
gi|7243765 - gi|7243765|gb|AAF43440.1|AF233886_1 unconventional myosin XI [Vallisneria natans]
gi|7243765 - gi|7243765|gb|AAF43440.1| unconventional myosin XI [Vallisneria gigantea]
143.0 [0..26] [191..891]
gi|50909237, gi|... - gi|50909237|ref|XP_466107.1| putative myosin XI [Oryza sativa (japonica cultivar-group)], gi|4638999...
132.0 [0..25] [181..745]

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Predicted Domain #1
Region A:
Residues: [1-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNTESELNE EFSNEFNIPP PTESSSKEGN RFLNDFRVEF EKRRIEARNR ILESEGRALE  60
   61 NKTHLNEEEI RTNERVKRFQ RRVDEWTALE IERESQVQPP LWYQRDREEQ NRTLNFLMSG 120
  121 MADLQRTINT MQGTMNTMQG TMNTMQENMI NFTNKVNTLD MRSVRAENRD LRKGAYVISP 180
  181 VPFING

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.154902
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [187-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNPDPDLPPI TSVQDVDRLS RSQCSRYLQG YGVTFHVNET IGMKKKLASA VGLSAEYDRE  60
   61 YPFSGFPN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 52.769551
Match: PF08593.1
Description: No description for PF08593.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle