| Protein: | SPAPB2B4.04c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1292 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAPB2B4.04c.
| Description | E-value | Query Range |
Subject Range |
|
|
775.0 | [0..3] | [1268..27] |
|
|
766.0 | [0..156] | [1152..17] |
|
|
765.0 | [0..156] | [1152..17] |
|
|
764.0 | [0..156] | [1152..17] |
|
|
764.0 | [0..156] | [1152..17] |
|
|
763.0 | [0..156] | [1152..17] |
|
|
762.0 | [0..153] | [1152..9] |
|
|
762.0 | [0..168] | [1152..153] |
|
|
762.0 | [0..2] | [1270..95] |
|
Region A: Residues: [1-176] |
1 11 21 31 41 51
| | | | | |
1 MPTYNDDDDS SRPPSVHSER NQKPSSSQFL GVPSSNYNQR ENSSRSGSST ISREPSSSGT 60
61 MYPMASRDSM KESYDKNKGT PPDYTSYVSH SDAEPEQASS KSSTSIEDLL HTEYDDAPFA 120
121 FSIPLLQRLQ DPKNTSLLHA IHGLKGLCKG LKVDPSTGIS THEPHYADKL QMSDIL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [177-1149] |
1 11 21 31 41 51
| | | | | |
1 NDDSNPKLVV HLDRIRSQDN NPEAKVSHDS DRVKYYGKNV LPEHDSKGLI RLMLEAFKDK 60
61 VLILLSIAAV VSLALGLYQT FGQPPTLDPI TGKPEPRVEW VEGVAIMAAI VIVVTVGGVN 120
121 DWQKELQFKK LNAKVSNFDV QVLRDGAVHS TSVFDLVVGD VLFVEAGDVV PVDGVLIESN 180
181 NLVLDESAMT GETDNIKKVD ANTAIERTSP DVEYRKNADP YLISGTTILE GNGKLLVTAV 240
241 GVNSFNGRTT MAMRTEGQAT PLQLRLSRVA DAIAKLGGAA SALLFIVLLI EFLVRLKSND 300
301 SSSKNKGQEF LQILIVSVTL LVVAVPEGLP LAVTLALAFA TNRMQKDNNL VRHLQACETM 360
361 GTATNICSDK TGTLTQNRMT VVAGGFGTDV LFFDHNDETP TNVDQGSDSS KFEDAGASAF 420
421 AFKRLSPELR DLTLYSIAVN STCRQLFEDN SDTPRFIGSK TETALLDMSV KELGLTNVDS 480
481 MRSSVDIKQF FSFSSDRKAS GAIFEYKDKY YFVVKGMPER VLQQSTSVIT NGSLDEVEDM 540
541 HSHADYFKEM ITGYAKRSLR TLGLCYRVFD SWPPKDIPTN DEDSSNPLKW EDAFTDMTFL 600
601 GFFGIMDPIR PDVPLAVKVC QGAGVTVRMV TGDNIVTAKA IASQCGIYTE DGISMEGPEF 660
661 RSLSDEKRLE ILPKLDVLAR SSPLDKQLLI EGLQKLGNVV AVTGDGTNDA PALKKANVGF 720
721 SMGKSGTEVA KEASDIILMD DNFSSIVKAI AWGRTVNDAV KKFLQFQITV NITAVFLTII 780
781 SAVASTDQSS VLTAVQLLWV NLIMDTLAAL ALATDPPTPE VLKRKPEKPG ASLFTFDMWK 840
841 MIICQSMYQL AVTLVLHFAG NSIFHYPSNT ADMNTIVFNT FVWLQLFNEI NNRRLDNKLN 900
901 IFERINHNFL FIAIFVIVAG IQVIIVFFGG AAFSVKRIDG KGWAISIVFG VISIPLGALI 960
961 RCVPNNFLRK VLP
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1iwoA |
| Description: | Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1150-1292] |
1 11 21 31 41 51
| | | | | |
1 VKTIDTVFSW ILNPRFRSKR RSTDHDVESL SLIPYEPTSP NEVIDSIRHS LGFVQRIRGG 60
61 RIRHLLNNSK FDKQMEALPE RLRPRVKQRF MKIRSPSVSS ATSVALMIPI STLVSEASGR 120
121 LGGHDIWISH NRQALDKKSS NVH
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 2o98P |
| Description: | No description for 2o98P was found. |
