YRC Public Data Repository - Protein Structure Prediction

Protein:	erg10
Organism:	Schizosaccharomyces pombe
Length:	395 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for erg10.

Description	E-value	Query Range	Subject Range
gi\|115251727, gi... - gi\|126700290\|ref\|YP_001089187.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile 630], ...	382.0	[0..3]	[394..1]
gi\|90573693, gi\|... - gi\|90573693\|ref\|ZP_01230204.1\| hypothetical protein CdifQ_02002956 [Clostridium difficile QCD-32g58]... gi\|255518068 - gi\|255518068\|ref\|ZP_05385744.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-97b... gi\|255651184 - gi\|255651184\|ref\|ZP_05398086.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-37x... gi\|254976268 - gi\|254976268\|ref\|ZP_05272740.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-66c... gi\|255093654 - gi\|255093654\|ref\|ZP_05323132.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile CIP 107... gi\|255315403 - gi\|255315403\|ref\|ZP_05356986.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-76w...	381.0	[0..3]	[394..1]
gi\|77996685, gi\|... - gi\|78044570\|ref\|YP_360188.1\| acetyl-CoA acetyltransferase [Carboxydothermus hydrogenoformans Z-2901]...	379.0	[0..3]	[395..1]
gi\|3309206 - gi\|3309206\|gb\|AAC26026.1\| thiolase B [Clostridium acetobutylicum] gi\|14994394, gi\|... - gi\|3309206\|gb\|AAC26026.1\| thiolase B [Clostridium acetobutylicum], gi\|15004782\|ref\|NP_149242.1\| acet...	372.0	[0..3]	[394..1]
gi\|150015301, gi... - gi\|82747493\|ref\|ZP_00909989.1\| Thiolase [Clostridium beijerincki NCIMB 8052], gi\|82724578\|gb\|EAP5933...	369.0	[0..3]	[395..1]
gi\|13622708, gi\|... - gi\|15675510\|ref\|NP_269684.1\| putative acetyl-CoA:acetyltransferase [Streptococcus pyogenes M1 GAS], ... gi\|71853939, gi\|... - gi\|71911157\|ref\|YP_282707.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS5005], gi\|7185...	366.0	[0..3]	[392..1]
gi\|56808838 - gi\|56808838\|ref\|ZP_00366550.1\| COG0183: Acetyl-CoA acetyltransferase [Streptococcus pyogenes M49 591...	366.0	[0..2]	[394..1]
gi\|50913512, gi\|... - gi\|50913512\|ref\|YP_059484.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS10394], gi\|509... gi\|19747411, gi\|... - gi\|19747411\|gb\|AAL96946.1\| putative acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS8232], ...	366.0	[0..2]	[394..1]
gi\|50914736, gi\|... - gi\|50914736\|ref\|YP_060708.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS10394], gi\|509...	365.0	[0..3]	[392..1]

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Predicted Domain #1

Region A:
Residues: [1-395]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNTEVYIVS AVRTPMGSFG GSFASLPATK LGSIAIKGAL ERVNIKPSDV DEVFMGNVVS  60
   61 ANLGQNPARQ CALGAGLPRS IVCTTVNKVC ASGMKATILG AQTIMTGNAE IVVAGGTESM 120
  121 SNAPYYAPKN RFGAKYGNVE LVDGLLRDGL SDAYDGLPMG NAAELCAEEH SIDRASQDAF 180
  181 AISSYKRAQN AQATKAFEQE IVPVEVPVGR GKPNKLVTED EEPKNLNEDK LKSVRAVFKS 240
  241 NGTVTAANAS TLNDGASALV LMSAAKVKEL GLKPLAKIIG WGEAAQDPER FTTSPSLAIP 300
  301 KALKHAGIEA SQVDYYEINE AFSVVAVANT KILGLDPERV NINGGGVAMG HPLGSSGSRI 360
  361 ICTLAYILAQ KDAKIGVAAV CNGGGGASSI VIERV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	78.154902
Match:	2ib7A
Description:	No description for 2ib7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits