| Protein: | SPBC2A9.11c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC2A9.11c.
| Description | E-value | Query Range |
Subject Range |
|
|
376.0 | [0..9] | [395..86] |
|
|
374.0 | [0..9] | [395..70] |
|
|
359.0 | [0..9] | [395..84] |
|
|
344.0 | [0..9] | [395..88] |
|
|
341.0 | [0..76] | [371..480] |
|
|
340.0 | [0..76] | [371..480] |
|
|
335.0 | [0..76] | [371..431] |
|
|
328.0 | [0..9] | [395..66] |
|
Region A: Residues: [1-63] |
1 11 21 31 41 51
| | | | | |
1 MKKEHHSPWP DSLKEFIGRC IQDAEENSQP ELEDEVKLLI SRQYEMGNIW NVDWSSMNLE 60
61 SLR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.725 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.677 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.648 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.533 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.533 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.498 | N/A | N/A | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.494 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.459 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.458 | N/A | N/A | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.434 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [64-171] |
1 11 21 31 41 51
| | | | | |
1 KLTNAQNTII EDKKRKVEKP VSGNQFSLLS EEDEVDKKEK RRRRFENGSR SQNNAKSEEL 60
61 KVNPENGAII GRSTELEKRY LRLTSAPDPD TVRPLPVLKQ TLELLKKK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.563 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.385 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.239 | N/A | N/A | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.209 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [172-395] |
1 11 21 31 41 51
| | | | | |
1 WKEEKNYAYI CDQFKSLRQD LTVQRIQNEF SVLVYEIHAR IALEKGDVGE YNQCQTQLFH 60
61 LYSFGIPGNT KEFLAYRILY MLFTKNRSEM NSLLANLKEE DKTNAAVTHA LEVRSAMATG 120
121 DYYKFFHLYL VAPNMGGYLM DLFIERERVQ AMIMMCKAYR PSLTMEFLAN TLAFEEMEDC 180
181 VNFFRSCNAV YDSKDPNRIL MKESTDRFEK CMKKHAVVDI KGQI
|
| Detection Method: | |
| Confidence: | 1.63 |
| Match: | 1rz4A |
| Description: | Crystal Structure of Human eIF3k |
Matching Structure (courtesy of the PDB): |
|
