YRC Public Data Repository - Protein Structure Prediction

Protein:	orc6
Organism:	Schizosaccharomyces pombe
Length:	264 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for orc6.

Description	E-value	Query Range	Subject Range
gi\|151944064 - gi\|151944064\|gb\|EDN62357.1\| ORC subunit [Saccharomyces cerevisiae YJM789] gi\|190405897 - gi\|190405897\|gb\|EDV09164.1\| ORC 50 kDa subunit [Saccharomyces cerevisiae RM11-1a] ORC6 - Subunit of the origin recognition complex, which directs DNA replication by binding to replication o... ORC6_YEAST - Origin recognition complex subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORC...	145.0	[0..1]	[94..1]
gi\|46439868, gi\|... - gi\|68475528\|ref\|XP_718112.1\| hypothetical protein CaO19.3289 [Candida albicans SC5314], gi\|68474991\|... orf19.10799, orf... - orf19.3289 CGDID:CAL0003421 Assembly 19, Contig19-10173 (3929, 2838) CDS, reverse complemented, tran...	139.0	[0..1]	[99..1]
gi\|44981054 - gi\|44981054\|gb\|AAS50906.1\| ABR135Cp [Ashbya gossypii ATCC 10895] gi\|45185365, gi\|... - gi\|45185365\|ref\|NP_983082.1\| ABR135Cp [Ashbya gossypii ATCC 10895], gi\|44981054\|gb\|AAS50906.1\| ABR13...	135.0	[0..1]	[93..1]
gi\|21622384 - gi\|21622384\|emb\|CAD37038.1\| putative protein [Neurospora crassa]	117.0	[0..4]	[75..3]
gi\|42544737, gi\|... - gi\|46109170\|ref\|XP_381643.1\| hypothetical protein FG01467.1 [Gibberella zeae PH-1], gi\|42544737\|gb\|E...	117.0	[0..3]	[93..2]
gi\|119175854, gi... - gi\|90298868\|gb\|EAS28499.1\| hypothetical protein CIMG_09703 [Coccidioides immitis RS], gi\|119175854\|r...	115.0	[0..1]	[103..1]
gi\|111064764 - gi\|111064764\|gb\|EAT85884.1\| hypothetical protein SNOG_07233 [Phaeosphaeria nodorum SN15]	107.0	[0..1]	[93..1]
gi\|50293841, gi\|... - gi\|50293841\|ref\|XP_449332.1\| unnamed protein product [Candida glabrata], gi\|49528645\|emb\|CAG62306.1\|... gi\|49528645 - gi\|49528645\|emb\|CAG62306.1\| unnamed protein product [Candida glabrata]	106.0	[0..1]	[97..1]
gi\|70992177, gi\|... - gi\|70992177\|ref\|XP_750937.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668485...	100.0	[0..1]	[135..1]

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Predicted Domain #1

Region A:
Residues: [1-103]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERQQIIESL RRIIPTESTE YNERLISLGE SFLEWSKYKH NLKATEELCR PYMAAHLACE  60
   61 LLSNDLNLEI NLLATPIPKK KYYKLFTYFQ EILSPLTKSL AAK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.898	0.349	pre-replicative complex assembly	a.74.1	Cyclin-like

Predicted Domain #2

Region A:
Residues: [104-264]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDLMETITYL CTKLGGSTAI PYVKQLVKAV VTNDMRIEHK RGIIIAAYLL VSAKAFGKDE  60
   61 LHINHTERRK AQSVLQDTSS ALQIQYWMHV LSESWQYKEI PLNGIEGYES QKQRIKPWSG 120
  121 IASMIQIDYE KRLQNYPIWK ACIEERIQYY KSQLEKDGTA S

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits