| Protein: | vtc4 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 721 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vtc4.
| Description | E-value | Query Range |
Subject Range |
|
|
788.0 | [0..1] | [717..1] |
|
|
781.0 | [0..1] | [717..1] |
|
|
779.0 | [0..1] | [716..39] |
|
|
749.0 | [0..1] | [717..1] |
|
|
747.0 | [0..1] | [721..1] |
|
|
728.0 | [0..1] | [719..1] |
|
|
728.0 | [0..1] | [716..1] |
|
|
722.0 | [0..2] | [719..3] |
|
|
722.0 | [0..1] | [718..1] |
|
|
722.0 | [0..1] | [720..1] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MKFGQLLKET LMYEYKYSYV NYDKLKKEIK RRNDQGGWSE EDESDFVELL EKELDKVYSF 60
61 QKNKSAEVME RIRFCEEQTD EVVRRLDSDN PPNENDFAIL ETELTDIMAT VHDLAKFSEL 120
121 NYTAFYKIIK KHDKHTGWIL KPVFAARLNA KPFFKEQYDL LVVKLSKLYD FVRTRGSPIK 180
181 GDSAAGGTQ
|
| Detection Method: |  |
| Confidence: | 53.102373 |
| Match: | PF03105.10 |
| Description: | No description for PF03105.10 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [190-474] |
1 11 21 31 41 51
| | | | | |
1 QNFVRQTTKY WVHPNNVTEL KIYILKHLPV LVFNPNKEFA REDAAITSIY YDNDDLDFYL 60
61 GRLEKREGAE AIRLRWYGNM DNNNIFVERK THREDWTGEK SVKARFPLKE KYVNAFLRGD 120
121 YTVEEAFAKM RKDGKKSLKE IESLERLAKE VQYTVLSRGM KPYVRSFYER TAFQLPGDAR 180
181 VRISLDTNLS LIREDGPSRA GNNWRRMDIG IDYPFDQLPD EDIVRFPYAI LEVKLQTQFG 240
241 QDPPEWVNNL VNSHLVEAVP KFSKFIHGVS TLFYDRVTLL PYWFP
|
| Detection Method: | |
| Confidence: | 1.53 |
| Match: | 2gfgA |
| Description: | No description for 2gfgA was found. |
|
Region A: Residues: [475-602] |
1 11 21 31 41 51
| | | | | |
1 QMDIDIRKPA THTFIQGRSQ SGTHSSSVSA NVLTDSENTP IHADGDNYVD EESRIGSSST 60
61 RNDNSTFQTS DSFQELDERT NLLDISKRKG RDSFVAALNS RLKDIKDSFF LETVPKFEEP 120
121 TEPTVIYE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.446 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.356 | a.74.1 | Cyclin-like |
| View | Download | 0.437 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.424 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.351 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
|
Region A: Residues: [603-721] |
1 11 21 31 41 51
| | | | | |
1 QKYVSPPGKR IYVPVRVEPK TYFALERTYL DYLRYSILMG SIGITLFSFA KTRSGILGAA 60
61 SFTLVALFAI FYSTFLYLWR AVNIAKHNAV RYDDRFGPTA ICVITFAAIS ANVILNFNA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
