YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC25B8.12c
Organism:	Schizosaccharomyces pombe
Length:	303 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC25B8.12c.

Description	E-value	Query Range	Subject Range
gi\|22127977, gi\|... - gi\|22127977\|ref\|NP_671400.1\| sugar phosphatase [Yersinia pestis KIM], gi\|21961122\|gb\|AAM87651.1\|AE01... gi\|45443724, gi\|... - gi\|45443724\|ref\|NP_995263.1\| sugar phosphatase [Yersinia pestis biovar Microtus str. 91001], gi\|4543...	185.0	[0..1]	[289..12]
gi\|51591505, gi\|... - gi\|51598223\|ref\|YP_072414.1\| sugar phosphatase [Yersinia pseudotuberculosis IP 32953], gi\|51591505\|e... gi\|77630962, gi\|... - gi\|77630962\|ref\|ZP_00793548.1\| COG0561: Predicted hydrolases of the HAD superfamily [Yersinia pseudo... Q663T6\|Q663T6_YERPS - Putative haloacid dehalogenase-like hydrolase - Yersinia pseudotuberculosis gi\|186893349, gi... - gi\|186893349\|ref\|YP_001870461.1\| sugar phosphatase [Yersinia pseudotuberculosis PB1/+], gi\|186696375...	180.0	[0..14]	[289..1]
gi\|167470733 - gi\|167470733\|ref\|ZP_02335437.1\| predicted hydrolase [Yersinia pestis FV-1] gi\|167055514, gi... - gi\|167425500\|ref\|ZP_02317253.1\| Cof-like hydrolase [Yersinia pestis biovar Mediaevalis str. K1973002... gi\|162351471, gi... - gi\|77632974\|ref\|ZP_00795136.1\| COG0561: Predicted hydrolases of the HAD superfamily [Yersinia pestis... gi\|165922067, gi... - gi\|165926207\|ref\|ZP_02222039.1\| Cof-like hydrolase [Yersinia pestis biovar Orientalis str. F1991016]... gi\|166213191, gi... - gi\|166213191\|ref\|ZP_02239226.1\| Cof-like hydrolase [Yersinia pestis biovar Antiqua str. B42003004], ... gi\|165991377, gi... - gi\|166009455\|ref\|ZP_02230353.1\| Cof-like hydrolase [Yersinia pestis biovar Antiqua str. E1979001], g... gi\|167422866, gi... - gi\|167422866\|ref\|ZP_02314619.1\| Cof-like hydrolase [Yersinia pestis biovar Orientalis str. MG05-1020... gi\|167401593, gi... - gi\|167401593\|ref\|ZP_02307087.1\| Cof-like hydrolase [Yersinia pestis biovar Antiqua str. UG05-0454], ... gi\|25303670 - pir\|\|AC0497 probable haloacid dehalogenase-like hydrolase YPO4093 [imported] - Yersinia pestis (stra... gi\|218931070, gi... - gi\|218931070\|ref\|YP_002348945.1\| sugar phosphatase [Yersinia pestis CO92], gi\|16124202\|ref\|NP_407515... gi\|108810129, gi... - gi\|108810129\|ref\|YP_654045.1\| sugar phosphatase [Yersinia pestis Antiqua], gi\|108782042\|gb\|ABG16100.... gi\|108777759, gi... - gi\|229904650\|ref\|ZP_04519761.1\| multifunctional Erythrose 4-P, mannose 1-P, and alpha-D-glucose-1-P ... gi\|229013117 - gi\|229013117\|ref\|NP_671400.2\| sugar phosphatase [Yersinia pestis KIM] gi\|229220772 - gi\|229220772\|ref\|NP_995263.2\| sugar phosphatase [Yersinia pestis biovar Microtus str. 91001] gi\|149290380, gi... - gi\|150260972\|ref\|ZP_01917700.1\| putative haloacid dehalogenase-like hydrolase [Yersinia pestis CA88-... gi\|229839800, gi... - gi\|229839800\|ref\|ZP_04459959.1\| multifunctional Erythrose 4-P, mannose 1-P, and alpha-D-glucose-1-P ... gi\|145597329, gi... - gi\|145597329\|ref\|YP_001161404.1\| sugar phosphatase [Yersinia pestis Pestoides F], gi\|145209025\|gb\|AB... gi\|229691223, gi... - gi\|229841884\|ref\|ZP_04462040.1\| multifunctional Erythrose 4-P, mannose 1-P, and alpha-D-glucose-1-P ... gi\|89105223, gi\|... - gi\|89105223\|ref\|ZP_01177746.1\| COG0561: Predicted hydrolases of the HAD superfamily [Yersinia pestis... gi\|229700200, gi... - gi\|229896762\|ref\|ZP_04511925.1\| multifunctional Erythrose 4-P, mannose 1-P, and alpha-D-glucose-1-P ...	180.0	[0..14]	[289..1]
gi\|224585630, gi... - gi\|224585630\|ref\|YP_002639429.1\| hypothetical protein SPC_3918 [Salmonella enterica subsp. enterica ... gi\|206710860, gi... - gi\|207859057\|ref\|YP_002245708.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Ente... gi\|197241280, gi... - gi\|197263025\|ref\|ZP_03163099.1\| phosphatase YidA [Salmonella enterica subsp. enterica serovar Saintp... gi\|194403742, gi... - gi\|194445079\|ref\|YP_002043081.1\| phosphatase YidA [Salmonella enterica subsp. enterica serovar Newpo... gi\|168260385, gi... - gi\|205350165\|gb\|EDZ36796.1\| phosphatase YidA [Salmonella enterica subsp. enterica serovar Hadar str.... gi\|62182319, gi\|... - gi\|62182319\|ref\|YP_218736.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Cholerae... gi\|205325651, gi... - gi\|205325651\|gb\|EDZ13490.1\| phosphatase YidA [Salmonella enterica subsp. enterica serovar Saintpaul ... gi\|161616948, gi... - gi\|161616948\|ref\|YP_001590913.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Para...	179.0	[0..14]	[294..1]
YH5A_SCHPO - Uncharacterized hydrolase C215.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC215.... SPBC215.10 - haloacid dehalogenase-like hydrolase	179.0	[0..6]	[297..11]
gi\|167992424, gi... - gi\|205329366\|gb\|EDZ16130.1\| phosphatase YidA [Salmonella enterica subsp. enterica serovar 4,[5],12:i... gi\|16422404, gi\|... - gi\|16767116\|ref\|NP_462731.1\| sugar phosphatase [Salmonella typhimurium LT2], gi\|16422404\|gb\|AAL22690... lcl\|NC_016856.1_... - [gene=yidA] [protein=sugar phosphatase] [protein_id=YP_005240097.1] [location=complement(4047898..40...	178.0	[0..14]	[294..1]
gi\|213416496 - gi\|213416496\|ref\|ZP_03349640.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi... gi\|213424958 - gi\|213424958\|ref\|ZP_03357708.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi... gi\|213581440 - gi\|213581440\|ref\|ZP_03363266.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi... gi\|213609652 - gi\|213609652\|ref\|ZP_03369478.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi... gi\|29139618, gi\|... - gi\|29143982\|ref\|NP_807324.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi st... gi\|197291630, gi... - gi\|197291630\|gb\|EDY30982.1\| phosphatase YidA [Salmonella enterica subsp. enterica serovar Schwarzeng... gi\|16762494 - gi\|16762494\|ref\|NP_458111.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi st... gi\|194737423, gi... - gi\|194737423\|ref\|YP_002116775.1\| phosphatase YidA [Salmonella enterica subsp. enterica serovar Schwa... gi\|204321906, gi... - gi\|204928473\|ref\|ZP_03219672.1\| phosphatase YidA [Salmonella enterica subsp. enterica serovar Javian... gi\|25303684, gi\|... - gi\|25303684\|pir\|\|AH0958 conserved hypothetical protein STY3947 [imported] - Salmonella enterica subs... gi\|213052915 - gi\|213052915\|ref\|ZP_03345793.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi... gi\|213647468 - gi\|213647468\|ref\|ZP_03377521.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi... gi\|213980624 - gi\|213980624\|ref\|ZP_03407883.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi... gi\|214001459 - gi\|214001459\|ref\|ZP_03412194.1\| sugar phosphatase [Salmonella enterica subsp. enterica serovar Typhi...	177.0	[0..14]	[291..1]
gi\|229505055, gi... - gi\|229505055\|ref\|ZP_04394565.1\| hypothetical protein VCF_000261 [Vibrio cholerae BX 330286], gi\|2293... gi\|227081535, gi... - gi\|227081535\|ref\|YP_002810086.1\| putative phosphatase [Vibrio cholerae M66-2], gi\|227009423\|gb\|ACP05... gi\|116189643, gi... - gi\|75830851\|ref\|ZP_00760122.1\| COG0561: Predicted hydrolases of the HAD superfamily [Vibrio cholerae... gi\|121728535, gi... - gi\|75815700\|ref\|ZP_00746196.1\| COG0561: Predicted hydrolases of the HAD superfamily [Vibrio cholerae... gi\|11354599 - pir\|\|D82208 conserved hypothetical protein VC1364 [imported] - Vibrio cholerae (strain N16961 serogr... gi\|124119838, gi... - gi\|153221134\|ref\|ZP_01952169.1\| conserved hypothetical protein [Vibrio cholerae MAK 757], gi\|1241198... gi\|126510104, gi... - gi\|153819359\|ref\|ZP_01972026.1\| conserved hypothetical protein [Vibrio cholerae NCTC 8457], gi\|12651... gi\|229351240, gi... - gi\|229511275\|ref\|ZP_04400754.1\| hypothetical protein VCE_002682 [Vibrio cholerae B33], gi\|229351240\|... gi\|229370714, gi... - gi\|229608059\|ref\|YP_002878707.1\| hypothetical protein VCD_002977 [Vibrio cholerae MJ-1236], gi\|22937... gi\|9655858, gi\|1... - gi\|9655858\|gb\|AAF94522.1\| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N169... gi\|229518393, gi... - gi\|229518393\|ref\|ZP_04407837.1\| hypothetical protein VCC_002417 [Vibrio cholerae RC9], gi\|229345108\|...	176.0	[0..15]	[289..1]
gi\|52787935, gi\|... - gi\|52787935\|ref\|YP_093764.1\| YxeH [Bacillus licheniformis ATCC 14580], gi\|52350437\|gb\|AAU43071.1\| Yx...	176.0	[0..14]	[293..12]
gi\|147675343, gi... - gi\|75826748\|ref\|ZP_00756183.1\| COG0561: Predicted hydrolases of the HAD superfamily [Vibrio cholerae...	176.0	[0..15]	[289..1]

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Predicted Domain #1

Region A:
Residues: [1-303]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAVDKTNNL PTLDTLQMVI SDVDGTLLDK HHRFHFRTYR AMKYIREKYP NFPIVLATGK  60
   61 QRSAVDLIRI PLDLDAFPAA HVNGCVLYNK GKIVYADHLK PEVVMEVVEA TKGNPNIANV 120
  121 VYDEHYVYAL TPGREDMKNV KRLAEIGEKV DFSMPCEEAI EKVKSGEIKV IKMAVCEDPD 180
  181 KLDVVRDILG KFPREKFATT QALEFCIELI PSNSNKGTAL QYITSNILPE VKNENVISFG 240
  241 DGQNDLSMFA IAGWSVAIKN GMPIAIEKAK AVSRVGNEEG AVGEVLERIF NIPEDYTPPP 300
  301 YTF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.30103
Match:	1rkqA
Description:	Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.55296860681783	bayes_pls_golite062009
hydrolase activity	0.996930438913923	bayes_pls_golite062009
phosphatase activity	0.0985887286442809	bayes_pls_golite062009
phosphoric ester hydrolase activity	0.0342238658800214	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: