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View Structure Prediction Details

Protein: SPBC16D10.06
Organism: Schizosaccharomyces pombe
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC16D10.06.

Description E-value Query
Range
Subject
Range
IRT3_ARATH - Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3
253.0 [0..6] [408..7]
gi|14582255 - gi|14582255|gb|AAK69429.1|AF275751_1 ZIP-like zinc transporter [Thlaspi caerulescens]
250.0 [0..6] [408..7]
gi|47575691, gi|... - gi|47575691|gb|AAT35823.1| root iron transporter protein [Malus xiaojinensis], gi|27549575|gb|AAO170...
243.0 [0..42] [408..33]
gi|7488829, gi|3... - pir||T06385 probable Fe(II) transport protein, root - garden pea, gi|3153889|gb|AAC17441.1| root iro...
242.0 [0..14] [408..1]
gi|60592737 - gi|60592737|dbj|BAD90843.1| ZIP family metal transporter [Thlaspi japonicum]
241.0 [0..45] [408..10]
gi|114582567 - gi|114582567|ref|XP_515998.2| PREDICTED: solute carrier family 39 (zinc transporter), member 10 [Pan...
239.0 [0..4] [407..468]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNNLSNSY NQYLAQESHQ ILRHLFLNKQ YSPLVKRDDD SSATVTCGGD ANEFNEYGHL  60
   61 GYRIGAIFVI LATSLIGMNL PLVLSKITKN RPNVYIEYLY LFARYFGSGV ILATAFIHLL 120
  121 APACNKLYDP CLDDLFGGYD WAPGICLISC WFILLLEVLL NRYVEWRFGM EIGDHHGPTL 180
  181 GAKQHSHSHE DGAHGV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HEHPVYDIEE CADGVEHECV KDDLEEVKLE PYTNTDSTDL TTKEEARSFL LKQQLTAFII  60
   61 LESSIILHSV IIGLTTAVSG EEFKTLFPVI IFHQAFEGCG LGSRLAGMAW GPKTAWVPWV 120
  121 LGVIYSLVTP IGMAAGLGVR EHWDPLAHGS YAAQGVLDAI SSGILVYAGL VELLAHDFLF 180
  181 SPERERNWYK LIYLLACSMA GTGVMALLGK WA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle