YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC15D4.06
Organism:	Schizosaccharomyces pombe
Length:	150 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC15D4.06.

Description	E-value	Query Range	Subject Range
gi\|18976639, gi\|... - gi\|18976639\|ref\|NP_577996.1\| ribosomal protein s18 alanine acetyltransferase [Pyrococcus furiosus DS...	133.0	[0..1]	[148..17]
gi\|14521872, gi\|... - gi\|5459092\|emb\|CAB50578.1\| N-terminal acetyltransferase [Pyrococcus abyssi GE5], gi\|14521872\|ref\|NP_... gi\|5459092, gi\|7... - pir\|\|D75017 n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi (strain Orsay), gi\|5459092\|emb...	132.0	[0..2]	[147..20]
gi\|14590218, gi\|... - gi\|3256685\|dbj\|BAA29368.1\| 172aa long hypothetical acetyltransferase [Pyrococcus horikoshii OT3], gi... gi\|7451125 - pir\|\|A71455 probable acetyltransferase - Pyrococcus horikoshii	130.0	[0..2]	[147..20]
gi\|57642149, gi\|... - gi\|57642149\|ref\|YP_184627.1\| ribosomal protein-alanine acetyltransferase RimI-like protein [Thermoco...	130.0	[0..1]	[147..16]
gi\|20807038 - gi\|20807038\|ref\|NP_622209.1\| Acetyltransferase [Thermoanaerobacter tengcongensis MB4] gi\|20807038, gi\|... - gi\|20807038\|ref\|NP_622209.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20515525\|g...	129.0	[0..2]	[148..4]
gi\|167039151, gi... - gi\|167039151\|ref\|YP_001662136.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp.... gi\|76797381, gi\|... - gi\|76797381\|ref\|ZP_00779704.1\| Ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter ethan... gi\|241884906, gi... - gi\|241902652\|ref\|ZP_04787384.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter broc... gi\|242230040, gi... - gi\|242258437\|ref\|ZP_04803241.1\| ribosomal-protein-alanine acetyltransferase [Thermoanaerobacter sp. ...	124.0	[0..2]	[148..3]
gi\|162459719, gi... - gi\|162459719\|ref\|NP_001105068.1\| silencing group B protein [Zea mays], gi\|14550116\|gb\|AAK67148.1\|AF3...	124.0	[0..1]	[149..1]
gi\|146295284, gi... - gi\|82500547\|ref\|ZP_00885956.1\| Ribosomal-protein-alanine acetyltransferase [Caldicellulosiruptor sac...	123.0	[0..3]	[148..6]
gi\|39996856, gi\|... - gi\|39996856\|ref\|NP_952807.1\| ribosomal-protein-alanine acetyltransferase [Geobacter sulfurreducens P...	123.0	[0..3]	[150..8]
gi\|219992356, gi... - gi\|89210568\|ref\|ZP_01188956.1\| Ribosomal-protein-alanine acetyltransferase [Halothermothrix orenii H...	121.0	[0..3]	[149..4]

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Predicted Domain #1

Region A:
Residues: [1-150]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTIVPYSHQ YLKDICQLIQ KDLSEPYSKY VYRYFVHQWP EFSFVALDND RFIGAVICKQ  60
   61 DVHRGTTLRG YIAMLAIVKE YRGQGIATKL TQASLDVMKN RGAQEIVLET EVDNEAAMSF 120
  121 YERLGFCRYK RLYRYYLNGT DAFRYILYPN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.522879
Match:	2ob0A
Description:	No description for 2ob0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits