| Protein: | SPBC23G7.06c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 745 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC23G7.06c.
| Description | E-value | Query Range |
Subject Range |
|
|
384.0 | [0..4] | [642..6] |
|
|
383.0 | [0..2] | [558..4] |
|
|
371.0 | [0..1] | [733..3] |
|
|
332.0 | [0..2] | [701..4] |
|
|
331.0 | [0..2] | [736..4] |
|
|
330.0 | [0..5] | [672..7] |
|
|
328.0 | [0..4] | [739..5] |
|
|
316.0 | [0..2] | [603..44] |
|
|
302.0 | [0..2] | [648..3] |
|
|
300.0 | [0..3] | [744..5] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MFFAFLITYL LGGVTFLPFI LFIYLLTRPT HKSEELRIIE PNNDCLTKLD KDIRIQGWIR 60
61 VTTKFLQGKS GSVKVQEIPQ DQLPKSSSDN AVTDRKTISP SGINNQYVIR NPKDVYYATV 120
121 QAGKLHLF
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [129-346] |
1 11 21 31 41 51
| | | | | |
1 DPVKTSELLH VINLHEILYQ KLVKQGLICL WTYSFKQRRL DYALLSYSKI SPAIKPLEAP 60
61 IDFDYASVHH NLTALSSPDT DWLNAFIGRI FLGIHKTEGF KSLVVEKLTK KLSRIKTPGI 120
121 MTDVKVIDVD VGEAIPTVNG LKFESLSNGG ELIVSADIWY EGDCSFKAET TANIKFGSHF 180
181 PSKTVPLALV IRLTHVSGKV RLLIKPPPSN RVWYAFYE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [347-398] |
1 11 21 31 41 51
| | | | | |
1 KPRLHLIVEP MVARKQLTNN YLINFITQKL VELVHETIVM PNMNDLAFFI DN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [399-745] |
1 11 21 31 41 51
| | | | | |
1 EAPIKGGLWD IELFRAPTIQ KPAEKDAKAE RKKSGLSSST SEESLNRHIS KRSSNSNDTA 60
61 PSSHIIADKN LEPTSNIQLK KNPDGNLVET SELSDSDENS VLSNKSSTLS KKVVENTSPL 120
121 KYTHSASKSF IGEVQDSLQA LKTKAHKPRS IGGDSSQTTL SETTKKYGSV AKKSFFQGVS 180
181 DAKSFVKKIK STYIDDSSSN SPSDIESNYS ADDNEISKSK AQNAIDFNVT NTHSPSRSIS 240
241 SEKSYKAAER GQQDKHNDVL VDLNPNVEAE KSNPHSNSQK TSKNDMSRNQ RNKYAKEIMT 300
301 GQPTLHPQGQ LPIQNVEQRA THKPLPRPPV QVETREPVRP VPPIPKL
|
| Detection Method: | |
| Confidence: | 2.0 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
