YRC Public Data Repository - Protein Structure Prediction

Protein:	apt1
Organism:	Schizosaccharomyces pombe
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for apt1.

Description	E-value	Query Range	Subject Range
APT_MASHI - Adenine phosphoribosyltransferase OS=Mastomys hildebrandtii GN=APRT PE=3 SV=1	169.0	[0..1]	[181..1]
gi\|42629427 - gi\|42629427\|ref\|ZP_00154974.1\| COG0503: Adenine/guanine phosphoribosyltransferases and related PRPP-...	168.0	[0..6]	[179..5]
APT_CRIGR - Adenine phosphoribosyltransferase OS=Cricetulus griseus GN=APRT PE=3 SV=2 APT_CRILO - (P47952) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)	168.0	[0..1]	[175..1]
APT_STOLO - Adenine phosphoribosyltransferase OS=Stochomys longicaudatus GN=APRT PE=3 SV=1	167.0	[0..1]	[175..1]
APT_RAT - Adenine phosphoribosyltransferase OS=Rattus norvegicus GN=Aprt PE=1 SV=1	166.0	[0..1]	[175..1]
APT_HAEIN - Adenine phosphoribosyltransferase OS=Haemophilus influenzae GN=apt PE=3 SV=1 APT_HAEIG - Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittGG) GN=apt PE=3 SV=1 gi\|42631865 - gi\|42631865\|ref\|ZP_00157403.1\| COG0503: Adenine/guanine phosphoribosyltransferases and related PRPP-... gi\|145271773, gi... - gi\|145639211\|ref\|ZP_01794818.1\| adenine phosphoribosyltransferase [Haemophilus influenzae PittII], g... APT_HAEI8 - Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=apt PE=3 SV=1 gi\|144978790, gi... - gi\|145629287\|ref\|ZP_01785086.1\| adenine phosphoribosyltransferase [Haemophilus influenzae 22.1-21], ... APT_HAEIN - Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / ... gi\|229810356, gi... - gi\|229846867\|ref\|ZP_04466974.1\| adenine phosphoribosyltransferase [Haemophilus influenzae 7P49H1], g...	166.0	[0..6]	[179..5]
APT_DIPCP - Adenine phosphoribosyltransferase OS=Dipodillus campestris GN=APRT PE=3 SV=1	166.0	[0..1]	[175..1]
APT_MUSSI - Adenine phosphoribosyltransferase OS=Mus spicilegus GN=Aprt PE=3 SV=1 APT_MOUSE - Adenine phosphoribosyltransferase OS=Mus musculus GN=Aprt PE=1 SV=2	165.0	[0..1]	[181..1]
APT_MANSM - Adenine phosphoribosyltransferase - Mannheimia succiniciproducens (strain MBEL55E)	165.0	[0..3]	[179..10]
gi\|78358828, gi\|... - gi\|78369155\|ref\|ZP_00839293.1\| Adenine phosphoribosyl transferase [Shewanella sp. PV-4], gi\|78358828...	165.0	[0..1]	[179..17]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDRINYLK NKLVQYPDFP KKGILFEDIM PIFQDPRAFG ILIDLLLEAV ETEFNNIDVI  60
   61 VGLEARGFLF GPTLALRANC AFVPVRKPNK LPGDLVVVSY NKEYSTDSFA IQKGTIKPGQ 120
  121 RVLIVDDILA TGGTALAADE LVTRLGGELV GHLFLLELTF LQGRKRLMAP TYTLLTGQDE 180
  181 APDGSEFA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.154902
Match:	2dy0A
Description:	No description for 2dy0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits