YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC186.07c
Organism:	Schizosaccharomyces pombe
Length:	332 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC186.07c.

Description	E-value	Query Range	Subject Range
SERA_METJA - D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1 SERA_METJA - D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / ...	348.0	[0..3]	[330..2]
gi\|26345686 - gi\|26345686\|dbj\|BAC36494.1\| unnamed protein product [Mus musculus]	343.0	[0..4]	[330..8]
gi\|114558531 - gi\|114558531\|ref\|XP_001141039.1\| PREDICTED: phosphoglycerate dehydrogenase isoform 5 [Pan troglodyte...	343.0	[0..4]	[330..48]
gi\|5771523, gi\|2... - gi\|5771523\|gb\|AAD51415.1\|AF171237_1 3-phosphoglycerate dehydrogenase [Homo sapiens], gi\|2674062\|gb\|A...	341.0	[0..4]	[330..8]
SERA_RAT - D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3	340.0	[0..4]	[330..8]
gi\|109014692 - gi\|109014692\|ref\|XP_001114103.1\| PREDICTED: phosphoglycerate dehydrogenase isoform 2 [Macaca mulatta...	339.0	[0..4]	[330..8]
SERA_MACFA - D-3-phosphoglycerate dehydrogenase - Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey)	339.0	[0..4]	[330..8]

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Predicted Domain #1

Region A:
Residues: [1-332]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIAFFSAQP YEKEPFEKVN ENYKHEIDYH ESILNKKTAV LAEKAPVVCV FVNDKVDADT  60
   61 LKVLAKNGTK LIALRCAGFN NVDLKAAADN GITVVRVPAY SPYAVAEYTI GLLLSLNRKI 120
  121 HRAYVRVRED DFNLNGLLGH DLHGKTIGLL GTGRIGGLVA KCLKLGFGCE VLAHDIKPNK 180
  181 ELEKFGIQFV EQQEVLAKAD FLCLHCPLTP DTEHLVDEKL LASMKKGVKI INTSRGGLVD 240
  241 TKALVKAIES GQVGGCAMDV YEGERRLFYR DLSNEVIKDT TFQQLANFPN VLVTSHQAFF 300
  301 TAEALSAIAH TTLKNVSDFA SQNNDPSVIV KN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	92.69897
Match:	2g76A
Description:	No description for 2g76A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits