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View Structure Prediction Details

Protein: lcf1
Organism: Schizosaccharomyces pombe
Length: 676 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lcf1.

Description E-value Query
Range		 Subject
Range
ACSA_THEEB - Acetyl-coenzyme A synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=acsA PE=3 SV=1
ACSA_SYNEL - Acetyl-coenzyme A synthetase OS=Synechococcus elongatus GN=acsA PE=3 SV=1
 454.0 [0..3] [669..23]
ACSA_SHESW - Acetyl-coenzyme A synthetase OS=Shewanella sp. (strain W3-18-1) GN=acsA PE=3 SV=1
 453.0 [0..2] [673..12]
gi|56461107, gi|... - gi|56461107|ref|YP_156388.1| AMP-(fatty) acid ligase [Idiomarina loihiensis L2TR], gi|56180117|gb|AA...
 453.0 [0..3] [673..11]
ACSA_SHEPC - Acetyl-coenzyme A synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=acsA PE=3 S...
 453.0 [0..2] [673..12]
gi|75907429, gi|... - gi|75907429|ref|YP_321725.1| acetyl-CoA synthetase [Anabaena variabilis ATCC 29413], gi|75701154|gb|...
 452.0 [0..4] [669..24]
ACSA_SHESA - Acetyl-coenzyme A synthetase OS=Shewanella sp. (strain ANA-3) GN=acsA PE=3 SV=1
 452.0 [0..2] [673..12]
ACSA_SHEB9 - Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS195) GN=acsA PE=3 SV=1
 452.0 [0..2] [673..12]
SO2743 - acetyl-coenzyme A synthetase
ACSA_SHEON - Acetyl-coenzyme A synthetase OS=Shewanella oneidensis (strain MR-1) GN=acsA PE=3 SV=1
 452.0 [0..2] [673..12]
ACSA_SHESR - Acetyl-coenzyme A synthetase OS=Shewanella sp. (strain MR-7) GN=acsA PE=3 SV=1
 451.0 [0..2] [673..12]
ACSA_SHEB8 - Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS185) GN=acsA PE=3 SV=1
ACSA_SHEB5 - Acetyl-coenzyme A synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=acsA PE=3 SV=1
 451.0 [0..2] [673..12]

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Predicted Domain #1
Region A:
Residues: [1-676] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVQSKAISK PKEHESAIYR NANFPDHLVE TYSDDVHTLF DVFRHSVKQF GNKKAMGYRN  60
   61 LVKEHVETKM VTKVVDGEKK EVPKSWSYFE LSDYNYLSFN DIYDKALRYA GALRKLGLNK 120
  121 GDKFELYAPT SAFWLLTAEA CLSQSMTIVT AYDTLGEEGL LHSLRESGVR GMYTEGHLLK 180
  181 TLVNPLKEIE SLEVIIYRND AKEEDIKTIQ EIRPNLKLIK FADFEKMSPP VEPDPPSPEE 240
  241 ICCIMYTSGS TGLPKGVILS HKNMVAIVTA IVKHVPEVTS KDYLLAYLPL AHILEFAFEN 300
  301 ICLAWGGTIG YANVRTLVDT NCRNCKGDIN TFRPTIMVGV PAVWEMVRKG IMSKLNAASA 360
  361 VKRSVFWTAY YTKAKLMRHN LPGSCVLDTA VFNKIRSMGT GGRLRYTLSG GSALSPDTKR 420
  421 FLSIVLCPML IGYGLTEISA AAMVQNPACF NLDDSAGSLL PCTEMKLVDC EEGNYNSHGH 480
  481 PPRGEIWLRG PSLTRGYLNR DKENKESFTP DGWFRTGDVG ELTPEGLLRI IDRKKNLVKT 540
  541 QNGEYIALEK LESRYRTSSL VSNICVYADQ TKVKPLAIIV PNEPVVRKLA TEQAGLSPDA 600
  601 SWEEVCHNKK VRQLVYDDLI RIGRSHHFAN IELIQNVVLV PIEFTPENGL VTAAQKLQRR 660
  661 KILDRFKKEI DAAYAE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 126.0
Match: 2p2bA
Description: No description for 2p2bA was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle