| Protein: | SPBC17A3.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 403 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC17A3.05c.
| Description | E-value | Query Range |
Subject Range |
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306.0 | [0..1] | [397..1] |
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306.0 | [0..1] | [397..1] |
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306.0 | [0..1] | [397..1] |
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305.0 | [0..1] | [397..1] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MESSREEALR CIGLARKYLN AGEYDKALKF ANKSLRIHAT TEGEDFVKQI EKQKLTGSPN 60
61 PQATPKQENK SNFFSEKQSV RENGNSSAGE KKQKWTSEQH LLVQKIIKY
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.834 | 0.005 | endoplasmic reticulum | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [110-260] |
1 11 21 31 41 51
| | | | | |
1 KNHQYYEILD LKKTCTDTEI KKSYKKLALQ LHPDKNHAPS ADEAFKMVSK AFQVLSDPNL 60
61 RAHYDRTGMD PESRASAASS SFSSNAGGHP GFSAYPQANM SPEDLFNSFF GDQFFSGPGT 120
121 FFFGGGPGIR VHQFGGRPRN FARRQQAQDM P
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.53309887293277 | bayes_pls_golite062009 |
| binding | 1.46542010527547 | bayes_pls_golite062009 |
|
Region A: Residues: [261-403] |
1 11 21 31 41 51
| | | | | |
1 PKSIFYQLLP LIVVILFAFL SNFSWSDSTS VNTRYSFQQN YKYTVPRTTA KHNIPYYMSQ 60
61 KDLDKLSSRD IRRLNEKVEH TYTQNVHNAC LREQQIKEDE IRRAQGWFFP DKEALKKAKE 120
121 LRLPNCEELN RLGYRTYSNS YYF
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| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
