YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC725.05c
Organism:	Schizosaccharomyces pombe
Length:	485 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC725.05c.

Description	E-value	Query Range	Subject Range
gi\|40742940, gi\|... - gi\|67901126\|ref\|XP_680819.1\| hypothetical protein AN7550.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	278.0	[0..11]	[471..149]
gi\|85074809 - gi\|85074809\|ref\|XP_965772.1\| hypothetical protein NCU00632 [Neurospora crassa OR74A] gi\|32408663, gi\|... - gi\|32408663\|ref\|XP_324812.1\| hypothetical protein [Neurospora crassa], gi\|28927585\|gb\|EAA36536.1\| hy...	275.0	[0..8]	[462..189]
gi\|46128323, gi\|... - gi\|46128323\|ref\|XP_388715.1\| hypothetical protein FG08539.1 [Gibberella zeae PH-1], gi\|42548098\|gb\|E...	272.0	[0..9]	[475..183]
gi\|109072699 - gi\|109072699\|ref\|XP_001103359.1\| PREDICTED: ectonucleotide pyrophosphatase/phosphodiesterase 1 [Maca...	267.0	[0..74]	[473..210]
gi\|219945, gi\|13... - gi\|219945\|dbj\|BAA02054.1\| nucleotide pyrophosphatase [Homo sapiens], gi\|189650\|gb\|AAA63237.1\| plasma...	267.0	[0..74]	[473..158]
gi\|16588834 - gi\|16588834\|gb\|AAL26912.1\| ecto-nucleotide pyrophosphatase [Rattus norvegicus]	264.0	[0..64]	[473..182]
gi\|87044961, gi\|... - gi\|87044961\|gb\|ABD17348.1\| ectonucleotide pyrophosphatase/phosphodiesterase 1 [Oryctolagus cuniculus...	264.0	[0..74]	[473..158]
gi\|114609330 - gi\|114609330\|ref\|XP_518743.2\| PREDICTED: ectonucleotide pyrophosphatase/phosphodiesterase 1 [Pan tro...	263.0	[0..74]	[473..210]

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Predicted Domain #1

Region A:
Residues: [1-485]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSWANIGSN EYLPLKNDRK AYLNQWAKRS GLAIAAICIL GILILAIVKL FCFKAIIFPI  60
   61 VGGSFNNGTN VFQSTVIVIS LDGFRADYLY RGFTPNLLSL AERNVHVPFL IPSFPSITFP 120
  121 NHYTIVTGLY PESHGIVSNN FFDPVTGKQF VNSMPECNKD PTWWDKGEPI WVNAERNNVR 180
  181 SAVHMWPGNE VENHGYRPTY SDGFNFDTTL REKKDRILEW LDLPDKDRPQ LLLAYAPHVD 240
  241 MVGHAFGPDS PELNIIIQEV DIVIGELIEG LKKRNIDKHV NIIFLSDHGM APTSDNRLIW 300
  301 LDNMFNLSAV AHRDAWPLGG FRGESDLDDE YIYESLVNYS RSSLPSAENW NVYSKKDIPS 360
  361 RWHYSNNERI APVWMIPDVG WSLVSMLDHS PELEYEPLGV HGYDNLSPVM RALFIASGSS 420
  421 FKNFKGKKLA PFQNTEIYGI LSHILDLPAQ PNNGTYEGAL PLRRNRNSTK EWLLKDIEQA 480
  481 YSKLI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	55.39794
Match:	2gsnA
Description:	No description for 2gsnA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits