| Protein: | SPBC776.17 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 254 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC776.17.
| Description | E-value | Query Range |
Subject Range |
|
|
278.0 | [0..8] | [254..22] |
|
|
278.0 | [0..11] | [254..122] |
|
|
277.0 | [0..8] | [254..67] |
|
|
275.0 | [0..8] | [254..22] |
|
|
275.0 | [0..8] | [254..22] |
|
Region A: Residues: [1-254] |
1 11 21 31 41 51
| | | | | |
1 MDKLKEKGFV KLEIYLENKK RLHSIFLKED TEDVEKKSLY LINVPITTTE KILKRAISQL 60
61 GGRIVNIYPN ISGLLKSGTH LRVKLVEPAE VKQVIKAASK KTTSLPWKFT QHTGLKRKNM 120
121 VIIFLEILMC LIGYVESYDR QFVNPRVLAE SVDSYMKRVT KKEIAEKRRL FAMKNQPDED 180
181 GFVTVVRSGR APVGRPQDAE RQLEKKKDTG IHKDFYRFQL REKKKKALLD LAHKFEFDKQ 240
241 RIQQLKEKRQ FKPY
|
| Detection Method: |  |
| Confidence: | 2.35 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 3.32086587430292 | bayes_pls_golite062009 |
| binding | 2.84652855524974 | bayes_pls_golite062009 |
| nucleic acid binding | 2.07488701626356 | bayes_pls_golite062009 |
| 1.23676130179002 | bayes_pls_golite062009 | |
| structural molecule activity | 1.11870738570663 | bayes_pls_golite062009 |
| protein binding | 0.826837409443725 | bayes_pls_golite062009 |
| mRNA binding | 0.132944695780323 | bayes_pls_golite062009 |
