YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC8C9.12c
Organism:	Schizosaccharomyces pombe
Length:	303 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC8C9.12c.

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	277.0	[0..14]	[294..175]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	272.0	[0..20]	[293..211]
gi\|46249805 - gi\|46249805\|gb\|AAH68561.1\| Solute carrier family 25 (mitochondrial carrier; phosphate carrier), memb...	271.0	[0..7]	[294..182]
gi\|109012614 - gi\|109012614\|ref\|XP_001083784.1\| PREDICTED: similar to solute carrier family 25 member 24 isoform 1 ...	270.0	[0..7]	[294..182]
gi\|74215395 - gi\|74215395\|dbj\|BAE41903.1\| unnamed protein product [Mus musculus]	269.0	[0..7]	[294..182]

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Predicted Domain #1

Region A:
Residues: [1-303]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYAAEDFDY EGLPIGSPMY AHLLAGAFSG ILEHSVMYPV DAIKTRMQML NGVSRSVSGN  60
   61 IVNSVIKISS TEGVYSLWRG ISSVIMGAGP SHAIYFSVLE FFKSKINASP DRPLASALAG 120
  121 ACAITISDAF MTPFDVIKQR MQLPSRKYKS ALHCATTVFR NEGLGAFYIS YPTCIAMSIP 180
  181 FTAIQVATYD TCMSFLNPNA VYDPTSHIIS GGLSGAIASS LTTPLDVVKT LLQTRGSSSI 240
  241 PEVRKCKGSL DVVRFIYNYG GIPSFFKGIR PRMVVAMPAT AVSWAAYEAG KEILIRVSKT 300
  301 SQA

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Detection Method:	PSI-BLAST
Confidence:	70.221849
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits