YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAPB24D3.08c
Organism:	Schizosaccharomyces pombe
Length:	349 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAPB24D3.08c.

Description	E-value	Query Range	Subject Range
gi\|86134306, gi\|... - gi\|86134306\|ref\|ZP_01052888.1\| zinc-binding dehydrogenase [Polaribacter sp. MED152], gi\|85821169\|gb\|...	281.0	[0..9]	[346..12]
gi\|75812768, gi\|... - gi\|75812768\|ref\|YP_320385.1\| zinc-containing alcohol dehydrogenase superfamily protein [Anabaena var...	274.0	[0..9]	[349..321]
gi\|76160992 - gi\|76160992\|gb\|ABA40459.1\| NADPH quinone oxidoreductase-like protein [Solanum tuberosum]	269.0	[0..9]	[346..1]
gi\|28872343, gi\|... - gi\|28872343\|ref\|NP_794962.1\| oxidoreductase, zinc-binding [Pseudomonas syringae pv. tomato str. DC30... tr\|Q87UR5\|Q87UR5... - Oxidoreductase, zinc-binding protein OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_523...	267.0	[0..9]	[347..1]
gi\|71733591, gi\|... - gi\|71733591\|ref\|YP_272602.1\| quinone oxidoreductase [Pseudomonas syringae pv. phaseolicola 1448A], g...	264.0	[0..9]	[347..1]
gi\|47564631, gi\|... - gi\|47564631\|ref\|ZP_00235676.1\| oxidoreductase, zinc-binding [Bacillus cereus G9241], gi\|47558783\|gb\|...	264.0	[0..9]	[346..1]
gi\|15234529, gi\|... - pir\|\|T05166 quinone reductase homolog F18E5.200 - Arabidopsis thaliana, gi\|7268955\|emb\|CAB81265.1\| p...	264.0	[0..9]	[345..1]
gi\|49478983, gi\|... - gi\|49478983\|ref\|YP_037595.1\| alcohol dehydrogenase, zinc-containing [Bacillus thuringiensis serovar ...	264.0	[0..9]	[346..1]
gi\|229601380, gi... - gi\|229601380\|ref\|YP_002867708.1\| oxidoreductase, zinc-binding dehydrogenase family [Bacillus anthrac... gi\|254738549 - gi\|254738549\|ref\|ZP_05196252.1\| oxidoreductase, zinc-binding dehydrogenase family protein [Bacillus ... gi\|254752867 - gi\|254752867\|ref\|ZP_05204903.1\| oxidoreductase, zinc-binding dehydrogenase family protein [Bacillus ... gi\|254759139 - gi\|254759139\|ref\|ZP_05211165.1\| oxidoreductase, zinc-binding dehydrogenase family protein [Bacillus ... gi\|21401433, gi\|... - gi\|65320790\|ref\|ZP_00393749.1\| COG0604: NADPH:quinone reductase and related Zn-dependent oxidoreduct... gi\|49186311, gi\|... - gi\|49186311\|ref\|YP_029563.1\| alcohol dehydrogenase, zinc-containing [Bacillus anthracis str. Sterne]... gi\|47503998, gi\|... - gi\|47528850\|ref\|YP_020199.1\| alcohol dehydrogenase, zinc-containing [Bacillus anthracis str. 'Ames A... gi\|30263461, gi\|... - gi\|30263461\|ref\|NP_845838.1\| alcohol dehydrogenase, zinc-containing [Bacillus anthracis str. Ames], ... gi\|165872349, gi... - gi\|165872349\|ref\|ZP_02216985.1\| oxidoreductase, zinc-binding dehydrogenase family [Bacillus anthraci... gi\|170708548, gi... - gi\|170708548\|ref\|ZP_02898989.1\| oxidoreductase, zinc-binding dehydrogenase family [Bacillus anthraci... gi\|167514952, gi... - gi\|167637445\|ref\|ZP_02395725.1\| oxidoreductase, zinc-binding dehydrogenase family [Bacillus anthraci... gi\|190564341, gi... - gi\|190565024\|ref\|ZP_03017945.1\| oxidoreductase, zinc-binding dehydrogenase family [Bacillus anthraci... gi\|172080588, gi... - gi\|177654623\|ref\|ZP_02936447.1\| oxidoreductase, zinc-binding dehydrogenase family [Bacillus anthraci... gi\|227813662, gi... - gi\|227813662\|ref\|YP_002813671.1\| oxidoreductase, zinc-binding dehydrogenase family [Bacillus anthrac...	263.0	[0..9]	[346..1]
gi\|77385669, gi\|... - gi\|77461666\|ref\|YP_351173.1\| zinc-containing alcohol dehydrogenase superfamily protein [Pseudomonas ...	262.0	[0..9]	[346..1]

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Predicted Domain #1

Region A:
Residues: [1-349]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSNNAVIIK KYLDSTAGYP VIGEHLAFEK REFDLENAQV DEETPVLLKN IYTSVDPYLR  60
   61 MRMQSPKHAS YIPPLELGKP FYNSTVAKVV KSTLDQYKPG MDVVFVSGWE EYTFVSKQAL 120
  121 GFLQPINNPY KLPLIDFVGS LGMPSQTAYC GLKHIGKPKA GETIYISAAS GAVGQMAGQL 180
  181 AKAMGLHVVG SVGSDEKFKI CLDSGYDSVF NYKKESPFKA LPRLCPKGID IYFENVGGET 240
  241 MDAVLENMNL QGRIIFCGAI SQYNNPNPYR VKNLGMVLVK SLTIQGFIVA NILPQYQEQY 300
  301 FEEMPKLIAE GKIKYKCDVY DGLESAPEAF IGMLQGKNSG KTIVKIADE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.522879
Match:	2j3hA
Description:	No description for 2j3hA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits