YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAP7G5.03
Organism:	Schizosaccharomyces pombe
Length:	703 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAP7G5.03.

Description	E-value	Query Range	Subject Range
PRM1_NEUCR - Plasma membrane fusion protein prm-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.... PRM1_NEUCR - Plasma membrane fusion protein prm-1 OS=Neurospora crassa GN=prm-1 PE=3 SV=1	744.0	[0..5]	[590..52]
PRM1_EMENI - Plasma membrane fusion protein prm1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46... PRM1_EMENI - Plasma membrane fusion protein prm1 OS=Emericella nidulans GN=prm1 PE=3 SV=1	732.0	[0..5]	[588..38]
gi\|46138455, gi\|... - gi\|46138455\|ref\|XP_390918.1\| hypothetical protein FG10742.1 [Gibberella zeae PH-1], gi\|42552156\|gb\|E...	714.0	[0..5]	[570..48]
PRM1 - Pheromone-regulated multispanning membrane protein involved in membrane fusion during mating; predic... PRM1_YEAST - Plasma membrane fusion protein PRM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRM1...	651.0	[0..2]	[595..4]
PRM1_ASPFU - Plasma membrane fusion protein prm1 OS=Aspergillus fumigatus GN=prm1 PE=3 SV=1 PRM1_ASPFU - Plasma membrane fusion protein prm1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 1013...	644.0	[0..5]	[588..40]
PRM1_USTMA - Plasma membrane fusion protein PRM1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=PRM1 PE=3 SV=1 PRM1_USTMA - Plasma membrane fusion protein PRM1 OS=Ustilago maydis GN=PRM1 PE=3 SV=1	636.0	[0..5]	[587..51]
PRM1_ASHGO - Plasma membrane fusion protein PRM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /... PRM1_ASHGO - Plasma membrane fusion protein PRM1 OS=Ashbya gossypii GN=PRM1 PE=3 SV=1	622.0	[0..5]	[587..7]
PRM1_ASPOR - Plasma membrane fusion protein prm1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=prm1 PE=3 ... PRM1_ASPOR - Plasma membrane fusion protein prm1 OS=Aspergillus oryzae GN=prm1 PE=3 SV=1	621.0	[0..5]	[588..40]
PRM1_ASPTN - Plasma membrane fusion protein prm1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=prm1 PE...	615.0	[0..5]	[588..39]
PRM1_CANAL - Plasma membrane fusion protein PRM1 OS=Candida albicans GN=PRM1 PE=2 SV=1 PRM1_CANAL - Plasma membrane fusion protein PRM1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PRM1 PE=2...	608.0	[0..1]	[622..1]

Back

Predicted Domain #1

Region A:
Residues: [1-180]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSYLSLAA RLSQCWISPW SLCCLYILMQ FFLFTKDLNT KIGDFVNDEQ ATCNYIQEKV  60
   61 DILLDSPSLI ANAAVRVAKD GIQSTVKIIL SGISDSLIAA ENVFIFFIEF SYGTYLCLIQ 120
  121 LAIDGILDAV ADVGEEIGTA VNDTLHAIAD EIEDTVSSLN EVFQSAEDSL EKVASWLGED 180
  181

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [181-328]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INLPNVSIPE IQSLRNFTLS SSYDTEFEKL KAGVNFDSAI NATKAAISKP FSSARNLILE  60
   61 KVSNYSFDTS MVSSPNKTHV VVCSTDDLTA ISSFILSSIY KIRKVVIISL LIIIAGLFLI 120
  121 SSIYEIWKWC RIRHKAFLLD EHIRSNKF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [329-543]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDTRDLISYI ESPISWNLKY FISALPLPCF LSVQLRWFIT YIFHPPAAMI LFISCTSFIS  60
   61 GILQLVLLNN IREDGSVISA LAQNSFHKVE SALANVSVAW ANSTNQIILK NQENINNNMF 120
  121 GSIHNTTLSL NSTLNTFMNE LNSSMTSAFG DTFLASTVQN VMNCLLYRKI ENFEEVLTWV 180
  181 YNKSHIELPL LPTDILSKSI DNQTIYSSLY SSLNS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [544-703]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNSTVSFSGI FDRVEKSVIS ELNFSFLFFL LWLLICAFGL IGVLSSWLKS LFLSLLDLVI  60
   61 PNPKENITLP VQSLAFPVTK SCRPPPIPPR ESHVYDFQNF QYEEDDCIDY KRSLGLISLS 120
  121 SDLAIDIPIS PAIISDIQFN SITTESEETT YLLKEKQDRY

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits