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View Structure Prediction Details

Protein: yip11, yip12
Organism: Schizosaccharomyces pombe
Length: 235 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for yip11, yip12.

Description E-value Query
Range
Subject
Range
gi|50547383, gi|... - gi|50547383|ref|XP_501161.1| YALI0B20988p [Yarrowia lipolytica], gi|49647027|emb|CAG83414.1| unnamed...
gi|49647027 - gi|49647027|emb|CAG83414.1| YALI0B20988p [Yarrowia lipolytica]
60.0 [0..6] [200..2]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSKRKRNPL QYQTSGSLDE ETNQRSAFPQ IDNNSASESL EYDIPLDGLD YLATVREEAR  60
   61 KLVPFVAARR EPETRETIPL RKLEIEAGKK SFDPFLRYLL NIIDKEGERL EQYMESSSLD 120
  121 ASILPKNLQQ WRVYIEHKAP CWAILAVVDL ATVLEILESL SSWLEKDAID LQSQWIFCFC 180
  181 YKLPELLNGE DISTLRSVLK SLRSTHTSFP ALQMSASALQ AVLVYRYGQK DLFQT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle