| Protein: | nup85 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 675 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nup85.
| Description | E-value | Query Range |
Subject Range |
|
|
601.0 | [0..42] | [668..18] |
|
|
599.0 | [0..42] | [668..18] |
|
|
597.0 | [0..42] | [668..18] |
|
|
595.0 | [0..5] | [666..38] |
|
|
592.0 | [0..42] | [668..18] |
|
|
565.0 | [0..42] | [671..18] |
|
|
563.0 | [0..42] | [668..18] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MESSDEVDLP VYHLQNAPIE NGKLNDWRSK GRTVAFKLHP FLRKGLAYIN NKEFDENTLK 60
61 SDKFEEVESL VYEFSTP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [78-675] |
1 11 21 31 41 51
| | | | | |
1 STLIEPNYLL TAWHELWEEL QDTYMTPILD SEANLLLLTQ FYGKISSLFR SKIIQVLEEL 60
61 QSRINEGEKD CQPVLDSLWE VESAWRCAEA IYFPPSSPYT LSTGILDWVN AYDPQPIADD 120
121 GLEIMAYRIP YQHPEFWPYV NKTAIRGLFE QTISCLEMSG LTKEWPVLKE TVDELIDILR 180
181 YSPCTHQKRI RSVSDFERRW KLWRSRLANL RHVVKKHRDI DSEVLDDFVV LLDILNGNKE 240
241 VIMLSCAHWQ EYFSALAFLY GPLDCKNPED ISLLYQLATG EDSKFYVNGT IEYEQICVNL 300
301 CSNEPLNAIK HAYLLDLGLA VHLADLLSKS GHLRDYITEE YPITLREHLI LEYGQCVLES 360
361 RNLWQTSFAY WKCVADSGYQ RIKACIPYVP LSDVDAKETA LQLCKQLKLR DEAQLVLTHW 420
421 ADELIARNHY GEALIALDNA ANYSALNRVT WELFDICIAE KKSFSPDKDE LLYELFSSPK 480
481 ACTPTLASII SPAATIHQYF FYLQHKKELN ASELLVGLLT MVDFPSSRFP KLLELLHEFL 540
541 NNPLQSNSTD FKLSLVNVYD CIAVLQDQQS TVKDQQLLLS IHERLSSAIS WYFLHLKK
|
| Detection Method: | |
| Confidence: | 1.3 |
| Match: | 2qx5A |
| Description: | No description for 2qx5A was found. |
