YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC16A3.10
Organism:	Schizosaccharomyces pombe
Length:	509 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC16A3.10.

Description	E-value	Query Range	Subject Range
gi\|113413682 - gi\|113413682\|ref\|XP_001129292.1\| PREDICTED: similar to O-acyltransferase (membrane bound) domain con...	373.0	[0..26]	[506..323]
CG18445-PA, FBpp... - This gene is referred to in FlyBase by the symbol Dmel\CG18445 (CG18445, FBgn0033476). It is a prote...	372.0	[0..9]	[509..19]
ALE1 - Broad-specificity lysophospholipid acyltransferase, part of MBOAT family of membrane-bound O-acyltra... ALE1_YEAST - Lysophospholipid acyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALE1 PE...	359.0	[0..1]	[509..1]
MBOA2_MOUSE - Lysophospholipid acyltransferase 2 OS=Mus musculus GN=Mboat2 PE=1 SV=1	359.0	[0..10]	[503..13]
MBOA2_RAT - Membrane-bound O-acyltransferase domain-containing protein 2 OS=Rattus norvegicus GN=Mboat2 PE=2 SV=...	358.0	[0..10]	[503..13]
gi\|45201367, gi\|... - gi\|45201367\|ref\|NP_986937.1\| AGR271Cp [Ashbya gossypii ATCC 10895], gi\|44986301\|gb\|AAS54761.1\| AGR27... gi\|44986301 - gi\|44986301\|gb\|AAS54761.1\| AGR271Cp [Ashbya gossypii ATCC 10895]	354.0	[0..1]	[508..1]
gi\|73980303 - gi\|73980303\|ref\|XP_532866.2\| PREDICTED: similar to O-acyltransferase (membrane bound) domain contain...	353.0	[0..20]	[506..115]
gi\|114576004 - gi\|114576004\|ref\|XP_515289.2\| PREDICTED: O-acyltransferase (membrane bound) domain containing 2 [Pan...	351.0	[0..8]	[506..11]

Back

Predicted Domain #1

Region A:
Residues: [1-197]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYLIDIPFE YFSSFLGVHP DQLKLLFCFL SAYPFAGILK RLPSAPWIRN LFSISIGLFY  60
   61 LIGVHHLYDG VLVLLFDALF TYFVAAFYRS SRMPWIIFIV ILGHTFSSHV IRYIYPSENT 120
  121 DITASQMVLC MKLTAFAWSV YDGRLPSSEL SSYQKDRALR KIPNILYFLG YVFFFPSLLV 180
  181 GPAFDYVDYE RFITLSM

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [198-509]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKPLADPYEK QITPHSLEPA LGRCWRGLLW LILFITGSSI YPLKFLLTPK FASSPILLKY  60
   61 GYVCITAFVA RMKYYGAWEL SDGACILSGI GYNGLDSSKH PRWDRVKNID PIKFEFADNI 120
  121 KCALEAWNMN TNKWLRNYVY LRVAKKGKRP GFKSTLSTFT VSAMWHGVSA GYYLTFVSAA 180
  181 FIQTVAKYTR RHVRPFFLKP DMETPGPFKR VYDVIGMVAT NLSLSYLIIS FLLLNLKESI 240
  241 HVWKELYFIV HIYILIALAV FNSPIRSKLD NKIRSRVNSY KLKSYEQSMK STSDTDMLNM 300
  301 SVPKREDFEN DE

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits