YRC Public Data Repository - Protein Structure Prediction

Protein:	mrpl31
Organism:	Schizosaccharomyces pombe
Length:	115 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mrpl31.

Description	E-value	Query Range	Subject Range
gi\|46122223, gi\|... - gi\|46122223\|ref\|XP_385665.1\| hypothetical protein FG05489.1 [Gibberella zeae PH-1], gi\|42550979\|gb\|E...	185.0	[0..1]	[115..1]
gi\|46097847, gi\|... - gi\|71008572\|ref\|XP_758229.1\| hypothetical protein UM02082.1 [Ustilago maydis 521], ref\|XP_399697.1\| ...	176.0	[0..1]	[115..151]
gi\|88183951, gi\|... - gi\|88183951\|gb\|EAQ91419.1\| hypothetical protein CHGG_03354 [Chaetomium globosum CBS 148.51], gi\|1162...	175.0	[0..1]	[115..1]
gi\|169612872, gi... - gi\|169612872\|ref\|XP_001799853.1\| hypothetical protein SNOG_09564 [Phaeosphaeria nodorum SN15], gi\|11...	172.0	[0..1]	[115..1]
gi\|40739570, gi\|... - gi\|67540412\|ref\|XP_663980.1\| hypothetical protein AN6376.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	165.0	[0..5]	[115..2]
gi\|39976785, gi\|... - gi\|39976785\|ref\|XP_369780.1\| hypothetical protein MGG_06295 [Magnaporthe grisea 70-15], gb\|EAA56324....	163.0	[0..1]	[115..1]
gi\|119190635, gi... - gi\|90304710\|gb\|EAS34341.1\| conserved hypothetical protein [Coccidioides immitis RS], gi\|119190635\|re...	161.0	[0..5]	[115..2]
gi\|169774385 - gi\|169774385\|ref\|XP_001821660.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|238497089, gi... - gi\|238497089\|ref\|XP_002379780.1\| 54S ribosomal protein L31, mitochondrial precursor, putative [Asper... gi\|83769523 - gi\|83769523\|dbj\|BAE59658.1\| unnamed protein product [Aspergillus oryzae]	158.0	[0..5]	[115..2]
gi\|114196440, gi... - gi\|115384402\|ref\|XP_001208748.1\| hypothetical protein ATEG_01383 [Aspergillus terreus NIH2624], gi\|1...	157.0	[0..5]	[115..2]
gi\|85080741 - gi\|85080741\|ref\|XP_956596.1\| hypothetical protein [Neurospora crassa OR74A] gi\|32403368, gi\|... - gi\|32403368\|ref\|XP_322297.1\| hypothetical protein [Neurospora crassa], gi\|28917666\|gb\|EAA27360.1\| hy...	150.0	[0..18]	[115..232]

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Predicted Domain #1

Region A:
Residues: [1-115]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGAFNSTLA RFGGLVHKVP WRLSQRRKYR HRQRLRAVDE VVDVLRTALQ EKNQSCKRIE  60
   61 SFVANHQPES QMSPKDKYTM FTRKTQGAGL QGFRKGVHKS PKWTRSTNRV NPTGF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.808	a.100.1	6-phosphogluconate dehydrogenase C-terminal domain-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits