YRC Public Data Repository - Protein Structure Prediction

Protein:	mrs2
Organism:	Schizosaccharomyces pombe
Length:	422 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mrs2.

Description	E-value	Query Range	Subject Range
gi\|86196468, gi\|... - gi\|86196468\|gb\|EAQ71106.1\| hypothetical protein MGCH7_ch7g513 [Magnaporthe grisea 70-15], gi\|1492100...	247.0	[0..15]	[401..87]
MRS2_GIBZE - Mitochondrial inner membrane magnesium transporter mrs2 OS=Gibberella zeae GN=MRS2 PE=3 SV=1 MRS2_GIBZE - Mitochondrial inner membrane magnesium transporter MRS2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4...	244.0	[0..15]	[402..62]
gi\|40741074, gi\|... - gi\|67903456\|ref\|XP_681984.1\| hypothetical protein AN8715.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	241.0	[0..14]	[400..685]
MRS2_YARLI - Mitochondrial inner membrane magnesium transporter mrs2 OS=Yarrowia lipolytica GN=MRS2 PE=3 SV=1 LPE10_YARLI - Mitochondrial inner membrane magnesium transporter LPE10 OS=Yarrowia lipolytica (strain CLIB 122 / E...	235.0	[0..14]	[402..42]
gi\|85544265, gi\|... - gi\|85544267\|pdb\|2BBJ\|F Chain F, Crystal Structure Of The Cora Mg2+ Transporter, gi\|85544266\|pdb\|2BBJ...	234.0	[0..66]	[394..48]
CORA_THEMA - Cobalt/magnesium transport protein CorA OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 ... CORA_THEMA - Magnesium transport protein CorA OS=Thermotoga maritima GN=corA PE=1 SV=1	234.0	[0..66]	[394..45]
gi\|221564892, gi... - gi\|222055603\|ref\|YP_002537965.1\| magnesium and cobalt transport protein CorA [Geobacter sp. FRC-32],...	232.0	[0..80]	[394..61]
MRS2_NEUCR - Mitochondrial inner membrane magnesium transporter mrs2 OS=Neurospora crassa (strain ATCC 24698 / 74... MRS2_NEUCR - Mitochondrial inner membrane magnesium transporter mrs2 OS=Neurospora crassa GN=mrs-2 PE=3 SV=1	228.0	[0..72]	[409..172]

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Predicted Domain #1

Region A:
Residues: [1-422]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLIVGFNLR TSIASFSPIC RSLFLFPKYR SRIIRPVVLL EKPFDKHFYA TDSNPLITGF  60
   61 PETSKNCPPS VAATKNRLLM NCTEFDDHGN VRVISGDFKK MDLCKQNGLL PRDLRKLNTS 120
  121 INSIVPVILV REGSILINLL HIRALIKANS VLLFDVYGSQ HSHSQSQFIY ELEGRLKQKS 180
  181 SDFGWLPYEM RALETILVSV VNTLDSELHV LHNLVSDLLA DFELDINQER LRTLLIFSKR 240
  241 LSGFLKKATL IRDVLDELLE QDQDLAGMYL TERLKTGKPR DLDKHDEVEL LLETYCKQVD 300
  301 EIVQQTDNLV GNIRSTEEIC NIMLDANRNS LMLLGLKLSA MTLGLGFGAV VASLYGMNLQ 360
  361 NGLENHPYAF YITTGSIFAF AAFLSSLGIL KIRRLKRIQM ALYHRCNLPI SLDPRSLRPP 420
  421 YL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	61.522879
Match:	2bbjA
Description:	Crystal structure of the CorA Mg2+ transporter
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits