YRC Public Data Repository - Protein Structure Prediction

Protein:	tom22
Organism:	Schizosaccharomyces pombe
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tom22.

Description	E-value	Query Range	Subject Range
gi\|41581261 - gi\|41581261\|emb\|CAE47910.1\| mitochondrial import receptor subunit tom22 homologue, putative [Aspergi...	179.0	[0..1]	[133..1]
gi\|42549474, gi\|... - gi\|46116546\|ref\|XP_384291.1\| hypothetical protein FG04115.1 [Gibberella zeae PH-1], gi\|42549474\|gb\|E...	174.0	[0..1]	[144..1]
TOM22_NEUCR, OM2... - Mitochondrial import receptor subunit tom-22 OS=Neurospora crassa GN=tom-22 PE=2 SV=1, (Q07335) Mito... TOM22_NEUCR - Mitochondrial import receptor subunit tom22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / C...	161.0	[0..1]	[141..1]
gi\|70995594, gi\|... - gi\|70995594\|ref\|XP_752552.1\| mitochondrial import receptor subunit tom22 [Aspergillus fumigatus Af29... gi\|159131307 - gi\|159131307\|gb\|EDP56420.1\| mitochondrial import receptor subunit tom22 [Aspergillus fumigatus A1163...	161.0	[0..1]	[132..1]
gi\|67517855, gi\|... - gi\|67517855\|ref\|XP_658709.1\| hypothetical protein AN1105.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	153.0	[0..1]	[139..1]
gi\|44986375 - gi\|44986375\|gb\|AAS54835.1\| AGR345Cp [Ashbya gossypii ATCC 10895] gi\|45201441, gi\|... - gi\|45201441\|ref\|NP_987011.1\| AGR345Cp [Ashbya gossypii ATCC 10895], gi\|44986375\|gb\|AAS54835.1\| AGR34...	151.0	[0..1]	[142..1]
gi\|240106716 - gi\|240106716\|gb\|EER24903.1\| Mitochondrial import receptor subunit Tom22 family protein [Coccidioides... gi\|90298230, gi\|... - gi\|90298230\|gb\|EAS27861.1\| hypothetical protein CIMG_09065 [Coccidioides immitis RS], gi\|119174166\|r...	146.0	[0..1]	[140..1]
gi\|83766762 - gi\|83766762\|dbj\|BAE56902.1\| unnamed protein product [Aspergillus oryzae] gi\|169768868 - gi\|169768868\|ref\|XP_001818904.1\| hypothetical protein [Aspergillus oryzae RIB40]	145.0	[0..1]	[139..1]
gi\|77022878, gi\|... - gi\|77022878\|ref\|XP_888883.1\| hypothetical protein CaO19_3696 [Candida albicans SC5314], gi\|68490876\|... gi\|76573696 - gi\|76573696\|dbj\|BAE44780.1\| hypothetical protein [Candida albicans]	142.0	[0..1]	[140..1]
gi\|39940060, gi\|... - gi\|39940060\|ref\|XP_359567.1\| hypothetical protein MG05210.4 [Magnaporthe grisea 70-15], gb\|EAA52518....	141.0	[0..1]	[134..1]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLEEVVDE TEVQNEQQTV IEKDQYIYAQ EDVEESDSDE SDFEGLEEET IIDRIAALKE  60
   61 IVPVTWRVKI ADGAKTATTG LSKLAQFGGK SMWVISTSAL LLGVPFMMSL EEEAQLTEYE 120
  121 KQIKDQRGAN EVIAPGATSG ALPQ

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	98.05061
Match:	PF04281.4
Description:	No description for PF04281.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.323	N/A	N/A	a.118.9	ENTH/VHS domain
View	Download	0.309	N/A	N/A	a.118.9	ENTH/VHS domain
View	Download	0.261	N/A	N/A	a.45.1	Glutathione S-transferase (GST), C-terminal domain
View	Download	0.237	N/A	N/A	a.40.1	Calponin-homology domain, CH-domain
View	Download	0.218	N/A	N/A	a.1.1	Globin-like
View	Download	0.213	N/A	N/A	a.40.1	Calponin-homology domain, CH-domain
View	Download	0.207	N/A	N/A	a.118.8	TPR-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits