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View Structure Prediction Details

Protein: SPBP8B7.08c
Organism: Schizosaccharomyces pombe
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBP8B7.08c.

Description E-value Query
Range
Subject
Range
TYW4_RAT - tRNA wybutosine-synthesizing protein 4 OS=Rattus norvegicus GN=Lcmt2 PE=2 SV=1
347.0 [0..3] [306..13]
gi|50510525 - gi|50510525|dbj|BAD32248.1| mKIAA0547 protein [Mus musculus]
344.0 [0..3] [306..30]
gi|73958698 - gi|73958698|ref|XP_850461.1| PREDICTED: similar to Leucine carboxyl methyltransferase 1 (Protein-leu...
327.0 [0..3] [296..151]
gi|6807738, gi|1... - gi|6807738|emb|CAB70677.1| hypothetical protein [Homo sapiens], pir||T46352 hypothetical protein DKF...
326.0 [0..3] [296..13]
gi|109127967 - gi|109127967|ref|XP_001099127.1| PREDICTED: leucine carboxyl methyltransferase 1 isoform 3 [Macaca m...
323.0 [0..3] [296..26]
gi|114661659 - gi|114661659|ref|XP_523323.2| PREDICTED: leucine carboxyl methyltransferase 1 isoform 4 [Pan troglod...
322.0 [0..3] [296..26]

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Predicted Domain #1
Region A:
Residues: [1-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDITETDLDA LKCRSSATKS GYIHDPFIKF FSPSRNSHKP PIINRGTYVR TWSIDHILQK  60
   61 FIESFDGKKQ IISLGAGTDT RVFRYISEYG PENLKFIEFD FYPNCIRKIR TIEKHEALKQ 120
  121 NIGDYVVDIS GGSLVSGSLD IYSYDIREIV HKGFPGFVDF SLPTIVLSEC CLCYLEPEEA 180
  181 SSLCRWFQNM FATSGIVVYE PIQGMDNFGK MMKANLSARG VILKTLDCYE TTEQQRMRFL 240
  241 DYGYSEVIAE DFLTIEETWI PIEEKKRTMS IEMLDELEEW QLLAKHYCLT FAATENLWNQ 300
  301 IILQLPHLKT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.69897
Match: 1rjdA
Description: Structure of PPM1, a leucine carboxy methyltransferase involved in the regulation of protein phosphatase 2A activity
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein methyltransferase activity 4.65643463984431 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 4.4632173842967 bayes_pls_golite062009
methyltransferase activity 4.15445027778357 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 4.07153733729662 bayes_pls_golite062009
N-methyltransferase activity 3.67177992319602 bayes_pls_golite062009
histone methyltransferase activity 3.4768933204909 bayes_pls_golite062009
arginine N-methyltransferase activity 2.91440420216458 bayes_pls_golite062009
protein-arginine N-methyltransferase activity 2.91440420216458 bayes_pls_golite062009
histone-arginine N-methyltransferase activity 2.45397942930513 bayes_pls_golite062009
transferase activity 2.22303238506686 bayes_pls_golite062009
protein-arginine omega-N monomethyltransferase activity 2.07640017323617 bayes_pls_golite062009
DNA-methyltransferase activity 1.63765148226572 bayes_pls_golite062009
histone methyltransferase activity (H4-R3 specific) 1.52139371235933 bayes_pls_golite062009
protein-arginine omega-N asymmetric methyltransferase activity 1.40758086578142 bayes_pls_golite062009
catalytic activity 1.25333584501255 bayes_pls_golite062009
RNA methyltransferase activity 0.817509452491588 bayes_pls_golite062009
site-specific DNA-methyltransferase (adenine-specific) activity 0.703178429468566 bayes_pls_golite062009
binding 0.348263200169904 bayes_pls_golite062009
protein-arginine omega-N symmetric methyltransferase activity 0.328046788565125 bayes_pls_golite062009
rRNA methyltransferase activity 0.230719796976667 bayes_pls_golite062009

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