| Protein: | SPBC25H2.16c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 533 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC25H2.16c.
| Description | E-value | Query Range |
Subject Range |
|
|
368.0 | [0..3] | [529..263] |
|
|
367.0 | [0..3] | [529..263] |
|
|
367.0 | [0..3] | [529..266] |
|
|
366.0 | [0..3] | [529..263] |
|
Region A: Residues: [1-350] |
1 11 21 31 41 51
| | | | | |
1 MSSAKRRLYS LIQNATEPYA FEPDLAVNLD IADLINQTGG NLPREAAFAI VRKVNDRNPT 60
61 VAYLALNLLD ICVKNCGYAF RLQIASKEFL NELVRRFPER PPSRLNKIQV MILSLIEEWR 120
121 KTICRVDRYK EDLGFIRDMH RLLSYKGYTF PEIDKENLAV LSQKSVLKTA EELEKEDREA 180
181 MSAKLQELIR RGTPADLAEA NKLMKVMAGY DTEQKQKYKE HVLVDLEKVK RKAALFGEML 240
241 NEVSESDKLA SGDLYDELAY SLKAAQRKVD KILEEMSPED DSYVTVSDLK SLIASLLTQY 300
301 DHLLEGDFSS ARTVAADNNS LLQATTESAK SNSKTSANAS NTQSAMDLLI
|
| Detection Method: |  |
| Confidence: | 50.30103 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [351-533] |
1 11 21 31 41 51
| | | | | |
1 DLDIGSDAQS PSLPASSSQM PTSSFNMESL SQSLLGTVEA PAEVGAISLT ESFNSPVSNS 60
61 SPNVPINNFT STCAFENSHL NFQITPKSKT RDQVVLLATY TNLSPYDTVE NLQSFIAVPK 120
121 KYNLVLQPQS GTNLSPLQKD GIYQEMIVTK LLDVTELPVR FKLTYKVNGR SQEYTGQSSI 180
181 RLL
|
| Detection Method: | |
| Confidence: | 31.0 |
| Match: | 1iu1A |
| Description: | Gamma1-adaptin domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.57801165255065 | bayes_pls_golite062009 |
| binding | 1.4853299341494 | bayes_pls_golite062009 |
| transporter activity | 0.169557557237959 | bayes_pls_golite062009 |
