YRC Public Data Repository - Protein Structure Prediction

Protein:	gpi15
Organism:	Schizosaccharomyces pombe
Length:	160 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gpi15.

Description	E-value	Query Range	Subject Range
gi\|46097381, gi\|... - gi\|71006080\|ref\|XP_757706.1\| hypothetical protein UM01559.1 [Ustilago maydis 521], ref\|XP_399174.1\| ...	142.0	[0..10]	[149..628]
gi\|46138643, gi\|... - gi\|46138643\|ref\|XP_391012.1\| hypothetical protein FG10836.1 [Gibberella zeae PH-1], gi\|42551037\|gb\|E...	136.0	[0..17]	[157..59]
gi\|28828657 - gi\|28828657\|gb\|AAO51260.1\| hypothetical protein [Dictyostelium discoideum] gi\|111226804, gi... - gi\|90970777\|gb\|EAS66909.1\| putative glycosyltransferase [Dictyostelium discoideum AX4], gi\|111226804...	133.0	[0..26]	[157..36]
PIGH_MOUSE - Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Mus musculus GN=Pigh PE=2 SV=1	132.0	[0..20]	[158..52]
ENSPTRT00000011843 - null gi\|60655901, gi\|... - gi\|60655901\|gb\|AAX32514.1\| phosphatidylinositol glycan class H [synthetic construct], gi\|60655899\|gb... PIGH - phosphatidylinositol glycan anchor biosynthesis, class H	132.0	[0..20]	[158..52]
gi\|60652811, gi\|... - gi\|60652811\|gb\|AAX29100.1\| phosphatidylinositol glycan class H [synthetic construct], gi\|60652809\|gb...	132.0	[0..20]	[158..52]
gi\|109479399, gi... - gi\|157823401\|ref\|NP_001102184.1\| phosphatidylinositol glycan anchor biosynthesis, class H [Rattus no...	132.0	[0..20]	[158..52]
gi\|109084024 - gi\|109084024\|ref\|XP_001107223.1\| PREDICTED: phosphatidylinositol glycan, class H isoform 2 [Macaca m...	132.0	[0..20]	[158..52]
PIGH_BOVIN - Phosphatidylinositol N-acetylglucosaminyltransferase subunit H OS=Bos taurus GN=PIGH PE=2 SV=1	129.0	[0..20]	[158..52]
gi\|18253011, gi\|... - gi\|22329188\|ref\|NP_195278.2\| phosphatidylinositolglycan-related [Arabidopsis thaliana], gi\|22136396\|...	128.0	[0..35]	[150..54]

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Predicted Domain #1

Region A:
Residues: [1-160]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTIKRYPGA IEFTVHTSKS YGTQMFALCF ISFVIGATSL AIGRSPKIII TLVELSFLLS  60
   61 LFHIISGVNH ESLFVIRDLG VQTNCHSIVP WKSSSKLIPL DSIRDIFINE GFRKFDVCYY 120
  121 MGIAIESETE IHVVFPTLLP RHDVLQKVYK ETVILLANNS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits