YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: alg3
Organism: Schizosaccharomyces pombe
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alg3.

Description E-value Query
Range
Subject
Range
gi|133778113, gi... - gi|76607389|ref|XP_871059.1| PREDICTED: similar to Not56-like protein isoform 1 [Bos taurus], gi|134...
503.0 [0..7] [401..26]
CE32691 - status:Partially_confirmed UniProt:Q9NAP5 protein_id:CAB70171.2
501.0 [0..16] [406..12]
gi|46101793, gi|... - gi|71024245|ref|XP_762352.1| hypothetical protein UM06205.1 [Ustilago maydis 521], ref|XP_403820.1| ...
494.0 [0..14] [400..12]
gi|57109914 - gi|57109914|ref|XP_535823.1| PREDICTED: similar to Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannos...
493.0 [0..7] [401..26]
gi|46136275, gi|... - gi|46136275|ref|XP_389829.1| hypothetical protein FG09653.1 [Gibberella zeae PH-1], gi|42553333|gb|E...
491.0 [0..25] [404..29]
gi|157753044 - gi|157753044|ref|XP_001680234.1| Hypothetical protein CBG20997 [Caenorhabditis briggsae AF16]
gi|187023237, gi... - gi|39591480|emb|CAE73534.1| Hypothetical protein CBG20997 [Caenorhabditis briggsae], gi|187023237|em...
487.0 [0..16] [406..12]
gi|114590804 - gi|114590804|ref|XP_516912.2| PREDICTED: asparagine-linked glycosylation 3 isoform 4 [Pan troglodyte...
485.0 [0..14] [401..33]
ALG3 - asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)
gi|123992969, gi... - gi|123999893|gb|ABM87455.1| asparagine-linked glycosylation 3 homolog (S. cerevisiae, alpha-1,3-mann...
485.0 [0..14] [401..33]
ALG3_NEUCR - Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Neurospora crassa (strain ATCC 246...
ALG3_NEUCR - Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase OS=Neurospora crassa GN=alg-3 PE=3 SV...
479.0 [0..25] [385..35]

Back

Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSVETRNSF NPFRVLFDLG SYGWLHPSRL LLLEIPFVFA IISKVPYTEI DWIAYMEQVN  60
   61 SFLLGERDYK SLVGCTGPLV YPGGHVFLYT LLYYLTDGGT NIVRAQYIFA FVYWITTAIV 120
  121 GYLFKIVRAP FYIYVLLILS KRLHSIFILR LFNDGFNSLF SSLFILSSCK KKWVRASILL 180
  181 SV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ACSVKMSSLL YVPAYLVLLL QILGPKKTWM HIFVIIIVQI LFSIPFLAYF WSYWTQAFDF  60
   61 GRAFDYKWTV NWRFIPRSIF ESTSFSTSIL FLHVALLVAF TCKHWNKLSR ATPFAMVNSM 120
  121 LTLKPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [309-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKLQLATPNF IFTALATSNL IGILCARSLH YQFYAWFAWY SPYLCYQASF PAPIVIGLWM  60
   61 LQEYAWNVFP STKLSSLIAV CVPLITILKL YTSDYRKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle