YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC530.13
Organism:	Schizosaccharomyces pombe
Length:	325 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC530.13.

Description	E-value	Query Range	Subject Range
gi\|114599953 - gi\|114599953\|ref\|XP_517728.2\| PREDICTED: cyclin B1 [Pan troglodytes]	244.0	[0..8]	[259..271]
gi\|109077471 - gi\|109077471\|ref\|XP_001091170.1\| PREDICTED: cyclin B1 isoform 2 [Macaca mulatta]	244.0	[0..8]	[259..167]
gi\|60655945 - gi\|60655945\|gb\|AAX32536.1\| cyclin B1 [synthetic construct]	242.0	[0..8]	[259..168]
CCNB1, CGB1 - chorionic gonadotropin, beta polypeptide 1, cyclin B1 gi\|123990181 - gi\|123990181\|gb\|ABM83901.1\| cyclin B1 [synthetic construct]	242.0	[0..8]	[259..168]

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Predicted Domain #1

Region A:
Residues: [1-325]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENENHVLS IRMSHPYYSE KEISRILSTR DPKENNLRMQ AFAWISTLSK TLKFPVRTSG  60
   61 LAMLLYSRFQ LFFPVNEIPL LECATACLVV ASKIEDTAKK FRDILLAHYL QKHPGSEVDA 120
  121 HSQKRILGLE RMTLELICFD FRVRHPHNYM VKFAKSLKFS SSTASIAWNV CTDAYKTYTM 180
  181 LKYPAHIVAV ASISIACKLQ QLPQPIIPRS FFAPPALTEA VIADILDLYM HYQPHTCIGN 240
  241 MYTTEKLLGL CVDFQRAQKN SGRPQKPPQI DPHSSSLADE YRESNKRLQE SKESCARFIL 300
  301 DCDRKYFNTE FEKRMLEERR NKGTV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	62.09691
Match:	2jgzB
Description:	No description for 2jgzB was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits