YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAPB2B4.06
Organism:	Schizosaccharomyces pombe
Length:	245 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAPB2B4.06.

Description	E-value	Query Range	Subject Range
ACO15_MOUSE - Acyl-coenzyme A thioesterase THEM5 OS=Mus musculus GN=Them5 PE=2 SV=1	138.0	[0..27]	[238..20]
gi\|40746633, gi\|... - gi\|67518061\|ref\|XP_658800.1\| hypothetical protein AN1196.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	137.0	[0..68]	[239..95]
gi\|115491463, gi... - gi\|115491463\|ref\|XP_001210359.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	137.0	[0..57]	[239..97]
gi\|116180210, gi... - gi\|88185030\|gb\|EAQ92498.1\| hypothetical protein CHGG_00733 [Chaetomium globosum CBS 148.51], gi\|1161...	133.0	[0..68]	[239..28]
gi\|42547796, gi\|... - gi\|46108896\|ref\|XP_381506.1\| hypothetical protein FG01330.1 [Gibberella zeae PH-1], gi\|42547796\|gb\|E...	132.0	[0..4]	[239..14]
gi\|149030762, gi... - gi\|157819023\|ref\|NP_001102028.1\| hypothetical protein LOC361993 [Rattus norvegicus], gi\|149030762\|gb...	132.0	[0..27]	[238..20]
gi\|119184192, gi... - gi\|90301810\|gb\|EAS31441.1\| hypothetical protein CIMG_06920 [Coccidioides immitis RS], gi\|119184192\|r...	132.0	[0..36]	[239..71]
gi\|70995376, gi\|... - gi\|70995376\|ref\|XP_752445.1\| thioesterase family protein [Aspergillus fumigatus Af293], gi\|66850080\|...	130.0	[0..68]	[239..121]
gi\|169781616 - gi\|169781616\|ref\|XP_001825271.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83774013 - gi\|83774013\|dbj\|BAE64138.1\| unnamed protein product [Aspergillus oryzae]	129.0	[0..68]	[239..115]
gi\|85090860 - gi\|85090860\|ref\|XP_958620.1\| hypothetical protein NCU09895 [Neurospora crassa OR74A] gi\|28919996, gi\|... - gi\|32418330\|ref\|XP_329643.1\| hypothetical protein [Neurospora crassa], gi\|28919996\|gb\|EAA29384.1\| co...	129.0	[0..66]	[239..19]

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Predicted Domain #1

Region A:
Residues: [1-245]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIASSLRLF GKAPASYLFN GFRRQMKNPL MKKGVVYAGV SGTCAAAGYM FGNFVMEKHI  60
   61 YQVKYTEEQE KEVLEVENRL QNLKIVKDLR QNPSFRELRM PFNRSNHSLT NNLLSGPGRI 120
  121 TVPPVIFYDK STRQVYAIAH VGKDVGLDDD TIHPGLIATC MDEVLAICSF LSLPNKIAVT 180
  181 ANLKLSNPTK AYTNHFYILR SHLEWTKGRK AQTHGTAYML DNEDPSKSTC VAIADGLFGM 240
  241 LSSFP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	13.39794
Match:	2ov9A
Description:	No description for 2ov9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits