| Protein: | mnl1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 787 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mnl1.
| Description | E-value | Query Range |
Subject Range |
|
|
634.0 | [0..20] | [495..108] |
|
|
632.0 | [0..20] | [495..80] |
|
|
631.0 | [0..20] | [493..128] |
|
|
630.0 | [0..25] | [497..60] |
|
|
629.0 | [0..20] | [493..184] |
|
Region A: Residues: [1-483] |
1 11 21 31 41 51
| | | | | |
1 MGSLHSIFCV CLILLCIFKE NSIVGAINSA RMVELRETSR RLFYHGYNNY MQFAFPNDEL 60
61 APLSCEGLGP DYENPNNIGV NDVRGDYLLT LVDVLDTLVV LGDREGFQDA VDKVIHHINF 120
121 ERDTKVQVFE ATIRILGGLL SSHIFASEEK YGFQIPLYKG ELLTLATELA ERLLPAFRTP 180
181 TGIPFARINL MKGVAYREVT ENCAAAASSL VLEFSMLTAL TGNNKFKASA ENAFFSVWKR 240
241 RSGIGLLGNS IDVLSGRWIY PVSGVGAGID SFYEYAFKSY IFLGDPRYLE VWQKSLESLR 300
301 HYTASLNEYY YQNVYSANGM VMSRWVDSLS AYFPGLLVLA GELELAKKMH LYYFSIYLKF 360
361 GQLPERYNLY TKSIELNGYP LRPEFAESTY YLYRATKDVF YLHVGELLLS NIENHLWTPC 420
421 GFAAVENLEK YTLSNRMESF FLSETLKYLF LLFDDDNPIH RSHHDFIFTT EGHLFPVTNQ 480
481 TRL
|
| Detection Method: |  |
| Confidence: | 176.0 |
| Match: | 1nxcA |
| Description: | Structure of mouse Golgi alpha-1,2-mannosidase IA reveals the molecular basis for substrate specificity among Class I enzymes (family 47 glycosidases) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| mannosyl-oligosaccharide mannosidase activity | 6.03401660757398 | bayes_pls_golite062009 |
| mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 5.94478263057567 | bayes_pls_golite062009 |
| mannosidase activity | 5.20286438265852 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 3.05728424511001 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 2.49671827314842 | bayes_pls_golite062009 |
| hydrolase activity | 2.48593524259701 | bayes_pls_golite062009 |
| binding | 1.49199031708525 | bayes_pls_golite062009 |
| catalytic activity | 1.31873306707813 | bayes_pls_golite062009 |
| alpha-mannosidase activity | 0.569290872152206 | bayes_pls_golite062009 |
| cation binding | 0.362242764130218 | bayes_pls_golite062009 |
| metal ion binding | 0.362242764130218 | bayes_pls_golite062009 |
| protein binding | 0.36081692928767 | bayes_pls_golite062009 |
| ion binding | 0.355220167272296 | bayes_pls_golite062009 |
| calcium ion binding | 0.121126738064555 | bayes_pls_golite062009 |
|
Region A: Residues: [484-680] |
1 11 21 31 41 51
| | | | | |
1 STSQRIYDGG EVCVAEDYDR SKWPMLYSLI ASRDDYDYVS HLVGIDNKAI PSYLIDPSGV 60
61 CKRPEYSDGF ELLYGSALVS PIKSVERVTN NVYISDIIGN KLKFVQKEGS NSLFLYTAGA 120
121 ESINENDTVF LTDPDYETFT RPDALYFDRT IAQLENPNSG QKTFGKFLQF DNDNSLPSKV 180
181 FKTVLLNNSM CQKPSDT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [681-787] |
1 11 21 31 41 51
| | | | | |
1 LDKDTAYIAP LGNCSWVQQA KNTNKAGLLI LITDGEFINP LENIHSQNSL FNWVKPYIPP 60
61 TILLKNENNF VSKWANVSVR QSDFDAPSYF QGTPVSNLYL CLKCINS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.430 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.358 | c.47.1 | Thioredoxin-like |
| View | Download | 0.385 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.527 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.408 | c.5.1 | MurCD N-terminal domain |
