YRC Public Data Repository - Protein Structure Prediction

Protein:	mug84
Organism:	Schizosaccharomyces pombe
Length:	120 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mug84.

Description	E-value	Query Range	Subject Range
gi\|109065378 - gi\|109065378\|ref\|XP_001084945.1\| PREDICTED: similar to phosphatidylinositol N-acetylglucosaminyltran...	182.0	[0..4]	[114..437]
gi\|74001439 - gi\|74001439\|ref\|XP_535591.2\| PREDICTED: similar to phosphatidylinositol N-acetylglucosaminyltransfer...	175.0	[0..4]	[114..126]
gi\|32422621, gi\|... - gi\|32422621\|ref\|XP_331754.1\| hypothetical protein [Neurospora crassa], gi\|28927498\|gb\|EAA36450.1\| hy... gi\|85119664 - gi\|85119664\|ref\|XP_965686.1\| hypothetical protein [Neurospora crassa OR74A]	174.0	[0..3]	[116..575]
gi\|42547631, gi\|... - gi\|46107998\|ref\|XP_381057.1\| hypothetical protein FG00881.1 [Gibberella zeae PH-1], gi\|42547631\|gb\|E...	166.0	[0..3]	[101..1687]
gi\|169144958 - gi\|169144958\|gb\|ACA49235.1\| GPI-GlcNAc transferase subunit P [Emericella nidulans] gi\|40740502, gi\|... - gi\|67902166\|ref\|XP_681339.1\| hypothetical protein AN8070.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	162.0	[0..3]	[103..190]
gi\|90301273, gi\|... - gi\|90301273\|gb\|EAS30904.1\| hypothetical protein CIMG_06383 [Coccidioides immitis RS], gi\|119182746\|r...	160.0	[0..3]	[103..1644]
gi\|116181486, gi... - gi\|88185668\|gb\|EAQ93136.1\| hypothetical protein CHGG_01371 [Chaetomium globosum CBS 148.51], gi\|1161...	159.0	[0..3]	[101..1586]
PIGP - phosphatidylinositol glycan anchor biosynthesis, class P	157.0	[0..4]	[114..33]

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Predicted Domain #1

Region A:
Residues: [1-120]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKVPTYEYY GFVMYLVSML GFGVYIVWAL TPAPVLKFFE IHYYLSRWWA LAIPTWLFVL  60
   61 VIYIHVVLNA YNTEVLTKPF SSLECIVDQY ALVGEEDGAA HGRVVDLRLC DVNKQQLEET 120
  121

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	54.744727
Match:	PF08510.3
Description:	No description for PF08510.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits