YRC Public Data Repository - Protein Structure Prediction

Protein:	mug77
Organism:	Schizosaccharomyces pombe
Length:	261 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mug77.

Description	E-value	Query Range	Subject Range
gi\|73973666 - gi\|73973666\|ref\|XP_854294.1\| PREDICTED: similar to Autophagy protein 5-like (APG5-like) (Apoptosis-s...	358.0	[0..6]	[260..3]
ATG5_PONPY - Autophagy protein 5 - Pongo pygmaeus (Orangutan) ATG5_PONAB - Autophagy protein 5 OS=Pongo abelii GN=ATG5 PE=2 SV=1	357.0	[0..6]	[260..3]
ATG5 - ATG5 autophagy related 5 homolog (S. cerevisiae) gi\|55627156, gi\|... - gi\|55627156\|ref\|XP_518659.1\| PREDICTED: hypothetical protein LOC462905 isoform 4 [Pan troglodytes], ... gi\|109072199, gi... - gi\|109072201\|ref\|XP_001088300.1\| PREDICTED: APG5 autophagy 5-like isoform 4 [Macaca mulatta], gi\|109...	357.0	[0..6]	[260..3]
ATG5_BOVIN - Autophagy protein 5 OS=Bos taurus GN=ATG5 PE=2 SV=2	356.0	[0..6]	[260..3]
ATG5_MOUSE - Autophagy protein 5 OS=Mus musculus GN=Atg5 PE=1 SV=1	356.0	[0..6]	[260..3]
ATG5_RAT - Autophagy protein 5 OS=Rattus norvegicus GN=Atg5 PE=2 SV=1	354.0	[0..6]	[260..3]
ATG5_PIG - Autophagy protein 5 OS=Sus scrofa GN=ATG5 PE=2 SV=1	347.0	[0..6]	[260..3]
gi\|57530282, gi\|... - gi\|57530282\|ref\|NP_001006409.1\| APG5 autophagy 5-like [Gallus gallus], gi\|53136704\|emb\|CAG32681.1\| h...	342.0	[0..6]	[260..3]

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Predicted Domain #1

Region A:
Residues: [1-261]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVDNNKGNI PELLWNGTIS VRIDYEGNSL AYLANVPRQS YFAQILPNVQ RLLAPSIPLS  60
   61 ECWLDYNGVP LKWHWPVGLL FDLLTVFDPD TPRAPVLWRI QLRSGLFPTT KILQMETMDT 120
  121 FRTYFFNCLK ESDYVRNGSS SGIIALSKAE TDTYWNAILN HDYYDFRPIA IKILFSKSKF 180
  181 IPLKIYLGAN APIIQTSAPL GSSLGEFLNK RLPDLFPSCD KFLIVKPVIH GITIFLQSVL 240
  241 DELNRDFCYI DGFLHIVLMK V

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	71.221849
Match:	2dymA
Description:	No description for 2dymA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits