| Protein: | SPBC336.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 378 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC336.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
153.0 | [0..1] | [259..703] |
|
|
151.0 | [0..3] | [269..32] |
|
|
151.0 | [0..3] | [269..24] |
|
|
150.0 | [0..1] | [266..671] |
|
|
149.0 | [0..3] | [269..194] |
|
Region A: Residues: [1-303] |
1 11 21 31 41 51
| | | | | |
1 MGVSSFYPPL HVQRRRKLFK ILQGGFPVRS LLDIGCGDAR FLSYLVPCND QVPIEFLAGI 60
61 DINEQSIERA TEALQVRTED FLQLRWRPLH IELLLGNIKD FTHYKHVDAV VASEFIEHCQ 120
121 VAEILAFEKL VFGNLKPNVC VVSTPNFEFN TIFEKLSTLT SSISSRTSTN FRHPEHVFEW 180
181 DRKEFAKWAY KICKRYPEYT VEFTGCGLLN DLIDGDDLLH FRPSSTYGFC TQIAVFHQSK 240
241 NNAASHCFLK DQNSSILLYK KITYPFMEQL FPPTVQQFMN LLKKAFFDHL FGRHCLLLFQ 300
301 VIA
|
| Detection Method: |  |
| Confidence: | 15.39794 |
| Match: | 1g6q1 |
| Description: | Arginine methyltransferase, HMT1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [304-378] |
1 11 21 31 41 51
| | | | | |
1 GKCALSVKLP FLFIWESSPL IRHAFHYDDS IYLSYCPELK KSKHKGIALA NSFSFRIAKV 60
61 LKKSRIFIIT FHHYV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.696 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.679 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.595 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.594 | d.222.1 | YbaB-like |
| View | Download | 0.567 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.553 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.552 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.527 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.514 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
