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View Structure Prediction Details

Protein: tea4
Organism: Schizosaccharomyces pombe
Length: 809 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tea4.

Description E-value Query
Range
Subject
Range
gi|55859657, gi|... - gi|55961276|emb|CAI13197.1| novel protein [Homo sapiens], gi|55960070|emb|CAI13076.1| novel protein ...
373.0 [0..59] [630..184]
gi|114632314 - gi|114632314|ref|XP_001167463.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
371.0 [0..59] [630..184]
gi|36796741, gi|... - gi|36796741|ref|NP_082305.1| dynamin binding protein [Mus musculus], gi|34732707|gb|AAQ81299.1| TUBA...
gi|162319584, gi... - gi|162319584|gb|AAI56875.1| Dynamin binding protein [synthetic construct], gi|151555199|gb|AAI48370....
357.0 [0..59] [630..185]
gi|109090226 - gi|109090226|ref|XP_001106775.1| PREDICTED: similar to dynamin binding protein [Macaca mulatta]
352.0 [0..59] [630..184]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIMESHFDP TQQNDSTIIE SRYSPEEYLE QSFEIQRIIS GENSEPQTVA SQEISDSQEE  60
   61 DTTLTSSQFE DCGTEYNEVV EDDEFRSEDE DDFMDEEEEY ALYEAELSSS PSIHEEVIDC 120
  121 NFVHAIRGFE ATVEGQVDAT KGDMMILLDD SNSYWWLVKM CKNLAIGYLP AEYIETPSER 180
  181 LARLNKYKNS ETSNSQQSVT LPPLDIVEKT LEAPSPNFRI KRVTFTCSSN SSDDEMDSEN 240
  241 DYEAMVNRTV AENGLEIEFS DSSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.154902
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted Domain #2
Region A:
Residues: [265-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSLSAEYRSE SEDHVTDSPA YVDLTELEGG FNQFNSTSFQ STSPLGLEIV ETEINGSSTT  60
   61 ADSKNSHSPY SKFSSAYPDA ENSNISKINI SIAGNKELYG NATQSDPSLY STWIANKHKT 120
  121 ASSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.69897
Match: 1ad5A
Description: Hemapoetic cell kinase Hck; Hemopoetic cell kinase Hck; Haemopoetic cell kinase Hck
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [389-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVDSPLRRSL SVDAMQSNAS FSSYSSTSNT DKSLRPSSYS AVSESSNFTH DVSRDNKEIS  60
   61 LNAPKSIIVS QSDSFDTSNV TQDAPNDVEK EPISGQMPNN LSVQSLKQLE VYPIRHSVSI 120
  121 EMPSEKLLSP RLYSSSTPSS PTKGFQKDDE EDSENRK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [546-681]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QADKVELSPS SLLRQMSLPV DSSSQSDAQC TTSSVYITAE RKAFSQSSID LSTLSNHHVN  60
   61 NEINRRSFAG GFTSLADELS EMRELLHESP APLECNEEMV IPTPELDASS AIPSSSISHD 120
  121 EDLLPRKNTE ESTSSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [682-809]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFSSLITSPA SLQYDENPFK QSVVAELNNN SSSVPFVDSA HASDIHAYDN DHVSTKNKEF  60
   61 NRRLREFILD PDSLSGLYWS VKSAGVRASR RVSRNIEGES VSSDLDDIFA NVLKGLSDEM 120
  121 ASLLNTNR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle