YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC328.09
Organism:	Schizosaccharomyces pombe
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC328.09.

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	272.0	[0..1]	[288..173]
gi\|60466585, gi\|... - gi\|66808853\|ref\|XP_638149.1\| EF-hand domain-containing protein [Dictyostelium discoideum AX4], gi\|60... MCFB_DICDI - Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1	269.0	[0..5]	[289..135]
gi\|114674911 - gi\|114674911\|ref\|XP_524071.2\| PREDICTED: solute carrier family 25, member 23 [Pan troglodytes]	268.0	[0..8]	[288..366]
gi\|46249805 - gi\|46249805\|gb\|AAH68561.1\| Solute carrier family 25 (mitochondrial carrier; phosphate carrier), memb...	266.0	[0..8]	[288..194]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	266.0	[0..1]	[289..15]
gi\|109012617 - gi\|109012617\|ref\|XP_001083681.1\| PREDICTED: similar to solute carrier family 25 member 24 isoform 2 ...	266.0	[0..8]	[288..175]

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Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHDNIPFPV TFAAGAVAGI SEVLTLYPLD VVKTRMQLSV GKSDYNGTFD CLKKIVKNEG  60
   61 PHRLYRGILP PILMEAPKRA LKFASNDTYS KLWRKVFKRK DSSPALSILT GSCAGFTETF 120
  121 VVVPFELMKI RLQDVKNASK YNGTVDCFTK IVKQERILAL YNGFEATMWR HVVWNAGYFG 180
  181 VIQKIRNSLT PASSRIGEIR NNLIAGTIGG IFGTFLSTPF DVIKSRIQTV PRIAGQVPKY 240
  241 NWAYPALVTV AREEGFTALY KGFVPKVLRL GPGGGILLVV FNSVIEFYKR CLVHNASA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	69.221849
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits