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View Structure Prediction Details

Protein: SPBC365.09c
Organism: Schizosaccharomyces pombe
Length: 304 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC365.09c.

Description E-value Query
Range
Subject
Range
KIN17_MOUSE - DNA/RNA-binding protein KIN17 OS=Mus musculus GN=Kin PE=1 SV=1
388.0 [0..1] [298..1]
gi|149021017, gi... - ref|XP_341555.1| similar to Kin protein [Rattus norvegicus], gi|157817336|ref|NP_001102999.1| antige...
382.0 [0..1] [292..1]
KIN - KIN, antigenic determinant of recA protein homolog (mouse)
gi|114629282 - gi|114629282|ref|XP_001148768.1| PREDICTED: HsKin17 protein isoform 1 [Pan troglodytes]
366.0 [0..1] [304..1]
gi|109088173 - gi|109088173|ref|XP_001107965.1| PREDICTED: similar to HsKin17 protein isoform 2 [Macaca mulatta]
366.0 [0..1] [304..1]
gi|114629284 - gi|114629284|ref|XP_507648.2| PREDICTED: HsKin17 protein isoform 2 [Pan troglodytes]
360.0 [0..1] [304..1]
gi|50731537 - gi|50731537|ref|XP_417297.1| PREDICTED: similar to HsKin17 protein; antigenic determinant of recA pr...
360.0 [0..1] [304..1]
gi|55962358 - gi|55962358|emb|CAI11855.1| KIN, antigenic determinant of recA protein homolog (mouse) [Danio rerio]
358.0 [0..1] [293..1]
gi|73949092 - gi|73949092|ref|XP_535194.2| PREDICTED: similar to HsKin17 protein isoform 1 [Canis familiaris]
357.0 [0..1] [304..1]
CE20297 - status:Partially_confirmed UniProt:Q9XWF2 protein_id:CAA21720.1
357.0 [0..1] [293..1]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRAEAGTPK AISNALKSKG LQRLRWYCSA CQKQMRDENG FKCHTQSEGH IRQMNVIAMN  60
   61 PGKRIQDFSN QFLRDFISLL RTAHGEKKIH FNQFYQEYIR DKNHVHMNAT RWHTLSEFCK 120
  121 FLGRQGMCRV EENEKGFFIS YIDKNPANIL RNEANKKRER QEKSDEEQRL RLLDEQIKRA 180
  181 YESAQNNEDN KDGSSREQPV LHEIDLSKKG NPIQLNLSSS SDSHSA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [227-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNEFFQTRNT PTFSFSSSSS QTSLKHKPKN VFAELNKSRK KNNKDSLDQG QNVKRPRSAV  60
   61 EDIIAQETMR EKRRNIKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle