| Protein: | dcp2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 741 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dcp2.
| Description | E-value | Query Range |
Subject Range |
|
|
436.0 | [0..2] | [378..3] |
|
|
431.0 | [0..2] | [338..3] |
|
|
429.0 | [0..2] | [338..3] |
|
|
427.0 | [0..2] | [338..3] |
|
|
426.0 | [0..2] | [377..76] |
|
Region A: Residues: [1-241] |
1 11 21 31 41 51
| | | | | |
1 MSFTNATFSQ VLDDLSARFI LNLPAEEQSS VERLCFQIEQ AHWFYEDFIR AQNDQLPSLG 60
61 LRVFSAKLFA HCPLLWKWSK VHEEAFDDFL RYKTRIPVRG AIMLDMSMQQ CVLVKGWKAS 120
121 SGWGFPKGKI DKDESDVDCA IREVYEETGF DCSSRINPNE FIDMTIRGQN VRLYIIPGIS 180
181 LDTRFESRTR KEISKIEWHN LMDLPTFKKN KPQTMKNKFY MVIPFLAPLK KWIKKRNIAN 240
241 N
|
| Detection Method: |  |
| Confidence: | 104.0 |
| Match: | 2a6tA |
| Description: | Crystal structure of S.pombe mRNA decapping enzyme Dcp2p |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [242-335] |
1 11 21 31 41 51
| | | | | |
1 TTKEKNISVD VDADASSQLL SLLKSSTAPS DLATPQPSTF PQPPVESHSS FDIKQKILHL 60
61 LNEGNEPKSP IQLPPVSNLP LNPPIQSSNS RLSH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [336-476] |
1 11 21 31 41 51
| | | | | |
1 DNNSFDPFAY LGLDPKNPSA SFPRVVSQNN MLTNKPVLNN HFQQSMYSNL LKDQNSVQHL 60
61 FAASDMPSPM ELPSPSTVYH QVFYPPTSTS VSSYGLGKTP QPAYGSSSPY VNGHQTQQIS 120
121 SLPPFQSQTQ FLARNSDNSG Q
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [477-617] |
1 11 21 31 41 51
| | | | | |
1 SYNSEGDSNS KRLLSMLSQQ DTTPSSSTLS KEANVQLANL FLTPNSLETK KFSDNSQGEE 60
61 ISDNLHGESC NNPNANSVHS AQLLQALLHP SATETKEETP KKTSDSLSLL TLLKSGLPTP 120
121 ANDLQNKSQN NERKASSQVK E
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.561 | 0.858 | mRNA processing | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [618-741] |
1 11 21 31 41 51
| | | | | |
1 LEVKNYSKST DLLKKTLRIP RNDEPLEAAN QFDLLKVSPQ QKSEVPPKRN ELSQSKLKNR 60
61 KKKENSETNK NHVDMSPGFV KILKRSPLAD QKKEDTQESD FKGSDDHFLS YLQSVVSSNS 120
121 NGLH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
